RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TIMP1P01033 207 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 SNRPB2P08579 225 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 BMP2P12643 396 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 RFC2P35250 354 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 HNF1BP35680 557 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 PPM1AP35813 382 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 PTGER3P43115 390 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 LCP2Q13094 533 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 STX5Q13190 355 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 LRRC73Q5JTD7 316 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 DGKKQ5KSL6 1271 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TMC8Q8IU68 726 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 MYLIPQ8WY64 445 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 CDK15Q96Q40 435 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 YTHDF1Q9BYJ9 559 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 KLHL25Q9H0H3 589 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 POLR1BQ9H9Y6 1135 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 MOV10Q9HCE1 1003 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 DNMT3BQ9UBC3 853 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 MYO7AQ13402 2215 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 MRASO14807 208 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CTSAP10619 480 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 C7P10643 843 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 ZNF182P17025 639 aaPredicted RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 HMGCLP35914 325 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 PLEKHG6Q3KR16 790 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 MPPE1Q53F39 396 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 TSPAN33Q86UF1 283 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP35-207ENST00000530546 PBXIP1Q96AQ6 731 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 ACOX2Q99424 681 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 C17orf80Q9BSJ5 609 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 WDR12Q9GZL7 423 aaKnown RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 PCDHAC1Q9H158 963 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 GPN2Q9H9Y4 310 aaPredicted RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 MAGEE1Q9HCI5 957 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CD320Q9NPF0 282 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CACNA2D2Q9NY47 1150 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CARD8Q9Y2G2 431 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 TCRBV3S1A0A5B6 114 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CLDN25C9JDP6 229 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 TNFRSF10AO00220 468 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 PRMT5O14744 637 aaPredicted RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 ESR1P03372 595 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 HGFP14210 728 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CCR2P41597 374 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 ILF2Q12905 390 aaKnown RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 TUBA3CQ13748 450 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 RPS6KA2Q15349 733 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 MAPRE2Q15555 327 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 PITRM1Q5JRX3 1037 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 PLPP4Q5VZY2 271 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 HTR3DQ70Z44 454 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 SYVN1Q86TM6 617 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 ZSWIM9Q86XI8 627 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 MMAAQ8IVH4 418 aaKnown RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 ZC3H7AQ8IWR0 971 aaKnown RBP11.36□□□□□ -0.59
USP35-207ENST00000530546 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 PEX5LQ8IYB4 626 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 ELMOD1Q8N336 334 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 TMCO5AQ8N6Q1 288 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 LKAAEAR1Q8TD35 194 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 RAB2BQ8WUD1 216 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 TCEAL4Q96EI5 215 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 OSBPL10Q9BXB5 764 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CIPCQ9C0C6 399 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 CLPBQ9H078 707 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 C11orf49Q9H6J7 331 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 HMG20AQ9NP66 347 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 C8orf4Q9NR00 106 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 PRSS21Q9Y6M0 314 aa11.36□□□□□ -0.59
USP35-207ENST00000530546 A0A0J9YYE9 177 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 ANKRD34BA5PLL1 514 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 CPNE6O95741 557 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 GUCA1CO95843 209 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 IGSF6O95976 241 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 TRBC1P01850 177 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
USP35-207ENST00000530546 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
USP35-207ENST00000530546 KANK2Q63ZY3 851 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 LINC00299Q6ZSB3 139 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 OR13F1Q8NGS4 319 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 KCNJ9Q92806 393 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 ASB2Q96Q27 587 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 LRRC3Q9BY71 257 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 NANOGQ9H9S0 305 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 IL26Q9NPH9 171 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 ASAH2Q9NR71 780 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 GMPR2Q9P2T1 348 aaKnown RBP11.35□□□□□ -0.59
USP35-207ENST00000530546 POLG2Q9UHN1 485 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 CRLS1Q9UJA2 301 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 RBMX2Q9Y388 322 aaKnown RBP11.35□□□□□ -0.59
USP35-207ENST00000530546 PCDHGA7Q9Y5G6 932 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 DOCK6Q96HP0 2047 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 DYTNA2CJ06 578 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 HIDE1A8MVS5 230 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 H7C0S8 307 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 RGS13O14921 159 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms