RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 ZNF548Q8NEK5 533 aaPredicted RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 OR5M8Q8NGP6 311 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 SYN2Q92777 582 aaPredicted RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 STAMBPL1Q96FJ0 436 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 NLRP4Q96MN2 994 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 ZBTB40Q9NUA8 1239 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 TRNAU1APQ9NX07 287 aaKnown RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 C1RLQ9NZP8 487 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 AGO1Q9UL18 857 aaKnown RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 A0A1B0GVT2 93 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 INO80B-WBP1J3KQ70 363 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 PGLSO95336 258 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SYF2O95926 243 aaKnown RBP6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 PTMAP06454 111 aaKnown RBP6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 PRF1P14222 555 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 LBPP18428 481 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 CD27P26842 260 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 CORO1AP31146 461 aaKnown RBP6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 NME5P56597 212 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 KIAA1024LP59773 190 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 DLK1P80370 383 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 NPRL3Q12980 569 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SLC39A14Q15043 492 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 PRTGQ2VWP7 1150 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 FAM174BQ3ZCQ3 159 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 TTC31Q49AM3 519 aaPredicted RBP6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 LRRC73Q5JTD7 316 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 CASC4Q6P4E1 433 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 NOTUMQ6P988 496 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 CNTN4Q8IWV2 1026 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 PEX5LQ8IYB4 626 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SFRP1Q8N474 314 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SLC38A5Q8WUX1 472 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 TMEM237Q96Q45 408 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 CSF3RQ99062 836 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SLX1AQ9BQ83 275 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 Q9N2K0 584 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 MTUS1Q9ULD2 1270 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 FZD10Q9ULW2 581 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 YIPF1Q9Y548 306 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SNX9Q9Y5X1 595 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
CAPRIN1-208ENST00000530008 SDR42E2A6NKP2 422 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 TMEM178BH3BS89 294 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 PPFIA2O75334 1257 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 SLC16A8O95907 504 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 IGHV2-70P01814 119 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 FGBP02675 491 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 CELA2AP08217 269 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 SPP1P10451 314 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 SAGP10523 405 aaPredicted RBP6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 SSTR2P30874 369 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 NT5C2P49902 561 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 ARF5P84085 180 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 IL1RL1Q01638 556 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 RPS6KA1Q15418 735 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 OASLQ15646 514 aaKnown RBP6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 FUT11Q495W5 492 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 ZNF789Q5FWF6 425 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 GRTP1Q5TC63 336 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 GLCCI1Q86VQ1 547 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 TRIML1Q8N9V2 468 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 B4GALNT2Q8NHY0 566 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 SEMA4DQ92854 862 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 RIT1Q92963 219 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 FAM84BQ96KN1 310 aaPredicted RBP6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 BTBD10Q9BSF8 475 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 SLC25A33Q9BSK2 321 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 TNMDQ9H2S6 317 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 CDH20Q9HBT6 801 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 KLHL1Q9NR64 748 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 MIOSQ9NXC5 875 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 TRPC4Q9UBN4 977 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 ACEP12821 1306 aa6.14□□□□□ -1.43
CAPRIN1-208ENST00000530008 ELOVL7A1L3X0 281 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 INAFM1C9JVW0 142 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GPR137BO60478 399 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 FCGR3BO75015 233 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 SEC22BO75396 215 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 RFPL2O75678 378 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 WISP2O76076 250 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAGE7O76087 117 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 LDLRP01130 860 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GH1P01241 217 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 S1PR1P21453 382 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 PSMB4P28070 264 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 FRKP42685 505 aaPredicted RBP6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 RGS7P49802 495 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 SLC12A3P55017 1021 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAGE1Q13065 139 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAGE4Q13068 117 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 CUL3Q13618 768 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 HFEQ30201 348 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 MDH1BQ5I0G3 518 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 SPOUT1Q5T280 376 aaKnown RBP6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 ZNF517Q6ZMY9 492 aaPredicted RBP6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 ERC1Q8IUD2 1116 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms