RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CSHL1Q14406 222 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ELOCQ15369 112 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TAF1BQ53T94 588 aaPredicted RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PRR23CQ6ZRP0 262 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CLEC14AQ86T13 490 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 EXOC3L1Q86VI1 746 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 C4orf33Q8N1A6 199 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SLC25A45Q8N413 288 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 FSTL5Q8N475 847 aaPredicted RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NKAPQ8N5F7 415 aaKnown RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ACMSDQ8TDX5 336 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NXNL1Q96CM4 212 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TLCD1Q96CP7 247 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PDLIM5Q96HC4 596 aaKnown RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 WWP1Q9H0M0 922 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 IGSF5Q9NSI5 407 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ZNF358Q9NW07 568 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SCHIP1Q9P0W5 487 aaPredicted RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TAAR2Q9P1P5 351 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 IKZF3Q9UKT9 509 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NOVA2Q9UNW9 492 aaKnown RBP11.89□□□□□ -0.51
TRAF3IP2-211ENST00000528599 EIF3FO00303 357 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 YY2O15391 372 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LRP3O75074 770 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ENO3P13929 434 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ACADLP28330 430 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 EPHA8P29322 1005 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ATP5DP30049 168 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SLC26A3P40879 764 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 RGS4P49798 205 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PLOD1Q02809 727 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ABRQ12979 859 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CLCA4Q14CN2 919 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CAPRIN2Q6IMN6 1127 aaKnown RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 IL27RAQ6UWB1 636 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ZNF771Q7L3S4 317 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 KANSL1Q7Z3B3 1105 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CCDC91Q7Z6B0 441 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SFTPA2Q8IWL1 248 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ARFGAP2Q8N6H7 521 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CABS1Q96KC9 395 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GPR78Q96P69 363 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GTPBP2Q9BX10 602 aaKnown RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DERL2Q9GZP9 239 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DPEP2Q9H4A9 486 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PCOLCE2Q9UKZ9 415 aa11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ZFC3H1O60293 1989 aaKnown RBP11.88□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PDZK1P1A8MUH7 402 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LMO7DNF2Z398 122 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ZBTB14O43829 449 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DFNA5O60443 496 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 KLHL2O95198 593 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CER1O95813 267 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LTA4HP09960 611 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SLC35G4P0C7Q5 338 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GIMD1P0DJR0 217 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MPC1LP0DKB6 136 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 COL6A2P12110 1019 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CD1DP15813 335 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 UAP1L1Q3KQV9 507 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 AGAP9Q5VTM2 703 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ABRAXAS1Q6UWZ7 409 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NEK10Q6ZWH5 1172 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PDZD3Q86UT5 571 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GKN2Q86XP6 184 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GATAD2AQ86YP4 633 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 RASGRP3Q8IV61 690 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 BANPQ8N9N5 519 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 FAM46DQ8NEK8 389 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SAP25Q8TEE9 199 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SKA2Q8WVK7 121 aaPredicted RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 INSM2Q96T92 566 aaPredicted RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 WASH6PQ9NQA3 447 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CFAP20Q9Y6A4 193 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CSNK1G3Q9Y6M4 447 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TRBV23OR9-2A0A075B6M9 112 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SRRM3A6NNA2 597 aaPredicted RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CDC7O00311 574 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SPAG7O75391 227 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MATN4O95460 622 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GLRBP48167 497 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MAGOHP61326 146 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DEFB133Q30KQ1 61 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DUS1LQ6P1R4 473 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MYO1HQ8N1T3 1032 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SDR16C5Q8N3Y7 309 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MINDY1Q8N5J2 469 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CFAP61Q8NHU2 1237 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ASB11Q8WXH4 323 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DLG3Q92796 817 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PTERQ96BW5 349 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 STMN4Q9H169 189 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms