RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MFSD3	Q96ES6	412 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	PPM1M	Q96MI6	270 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	OR6C1	Q96RD1	312 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	FERD3L	Q96RJ6	166 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	TTC1	Q99614	292 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	HGH1	Q9BTY7	390 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	MVB12B	Q9H7P6	319 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	MRM3	Q9HC36	420 aa	Known RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	CATSPERZ	Q9NTU4	200 aa		11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.44	□□□□□ -0.58
PSMC3-205	ENST00000528362	GCN1	Q92616	2671 aa	Known RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	UBA6	A0AVT1	1052 aa	Predicted RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	IQCF5	A8MTL0	148 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	CES2	O00748	559 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	PRMT5	O14744	637 aa	Predicted RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	CD3EAP	O15446	510 aa	Known RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	PHF2	O75151	1096 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	AVIL	O75366	819 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	LIF	P15018	202 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	FOLR1	P15328	257 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ZNF28	P17035	718 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ITGB6	P18564	788 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	POLR2C	P19387	275 aa	Predicted RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	CCR7	P32248	378 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	FNTA	P49354	379 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	PRKG2	Q13237	762 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	IL11RA	Q14626	422 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	SYTL3	Q4VX76	610 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ZNF449	Q6P9G9	518 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	FBXO38	Q6PIJ6	1188 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	CAND1	Q86VP6	1230 aa	Known RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	KMT5C	Q86Y97	462 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	NLGN4X	Q8N0W4	816 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	IL22RA1	Q8N6P7	574 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	OR5AR1	Q8NGP9	310 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	SLC39A7	Q92504	469 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ELMO2	Q96JJ3	720 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	TRIM56	Q9BRZ2	755 aa	Known RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ULBP3	Q9BZM4	244 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	SRMS	Q9H3Y6	488 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	TFB2M	Q9H5Q4	396 aa	Known RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	XKR8	Q9H6D3	395 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	POMT2	Q9UKY4	750 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	PYCARD	Q9ULZ3	195 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	SOX13	Q9UN79	622 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	CDYL	Q9Y232	598 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ASF1A	Q9Y294	204 aa		11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	ZFC3H1	O60293	1989 aa	Known RBP	11.43	□□□□□ -0.58
PSMC3-205	ENST00000528362	GOLGA6L10	A0A0M3HER8	536 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	BTN3A3	O00478	584 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	BTN3A1	O00481	513 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	VAPB	O95292	243 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	TIAF1	O95411	115 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	PRB1	P04280	392 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	EBLN1	P0CF75	366 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	FGF5	P12034	268 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	MAP4	P27816	1152 aa	Known RBP	11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	PPARG	P37231	505 aa	Predicted RBP	11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	TTPA	P49638	278 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	PLOD1	Q02809	727 aa	Predicted RBP	11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	TUBB3	Q13509	450 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	ARMC6	Q6NXE6	501 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	AMIGO1	Q86WK6	493 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	VRK3	Q8IV63	474 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	UNC5B	Q8IZJ1	945 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	CARF	Q8N187	725 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	KRT222	Q8N1A0	295 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	D2HGDH	Q8N465	521 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	SIDT2	Q8NBJ9	832 aa	Known RBP	11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	MCU	Q8NE86	351 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	ANP32B	Q92688	251 aa	Known RBP	11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	P2RY12	Q9H244	342 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	ICK	Q9UPZ9	632 aa		11.42	□□□□□ -0.58
PSMC3-205	ENST00000528362	LOC101059948	A0A1B0GTJ6	334 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	GSAP	A4D1B5	854 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	GOLGA8K	D6RF30	607 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362		F8W8V4	182 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	GOLGA8T	H3BQL2	631 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	GOLGA8M	H3BSY2	632 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	TK2	O00142	265 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	MATN2	O00339	956 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	GPC4	O75487	556 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	SPAG6	O75602	509 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	C1QL1	O75973	258 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	KIAA0754	O94854	1291 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	ZBTB11	O95625	1053 aa	Predicted RBP	11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	TPBGL	P0DKB5	382 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	MLN	P12872	115 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	TCP1	P17987	556 aa	Known RBP	11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	RPS3	P23396	243 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	2e-8	■■■■■ 39.2
PSMC3-205	ENST00000528362	STAT5A	P42229	794 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	MAGEA3	P43357	314 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	CSE1L	P55060	971 aa	Known RBP	11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	CYP4F2	P78329	520 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	HSD11B2	P80365	405 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	SARNP	P82979	210 aa	Known RBP	11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	ACY1	Q03154	408 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	ABHD18	Q0P651	414 aa		11.41	□□□□□ -0.58
PSMC3-205	ENST00000528362	HSPA14	Q0VDF9	509 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms