RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 ZNF549Q6P9A3 640 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 NAPRTQ6XQN6 538 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 FAM83HQ6ZRV2 1179 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 TRMT10CQ7L0Y3 403 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 STRA8Q7Z7C7 330 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 TAF8Q7Z7C8 310 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ZNF761Q86XN6 746 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 LMNTD2Q8IXW0 634 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 LILRA3Q8N6C8 439 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 PPM1NQ8N819 430 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 GABPB2Q8TAK5 448 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 CDKL2Q92772 493 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 TCF12Q99081 682 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 NDNQ99608 321 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 TIMM29Q9BSF4 260 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 P2RY12Q9H244 342 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 TRNAU1APQ9NX07 287 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 NLGN3Q9NZ94 848 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 GULP1Q9UBP9 304 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ITPR2Q14571 2701 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ICE1Q9Y2F5 2266 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 A0A1W2PNU3 283 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 SUV39H1O43463 412 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 FAM155BO75949 473 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 MT-CO3P00414 261 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 FTH1P02794 183 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 ABHD2P08910 425 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 OR56A5P0C7T3 313 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 CD151P48509 253 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 CSE1LP55060 971 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 BOP1Q14137 746 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 NFE2L1Q14494 772 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 BRD3Q15059 726 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 ELOCQ15369 112 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 SEPT7Q16181 437 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 UAP1Q16222 522 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 ZNF449Q6P9G9 518 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 XKR5Q6UX68 686 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 KIAA0408Q6ZU52 694 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 TMPRSS9Q7Z410 1059 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 GALNT7Q86SF2 657 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 AMZ2Q86W34 360 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 LRRC6Q86X45 466 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 FSTL5Q8N475 847 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 MYRIPQ8NFW9 859 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 IFI44Q8TCB0 444 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 HM13Q8TCT9 377 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 GPBAR1Q8TDU6 330 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 GSDMCQ9BYG8 508 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 DPH1Q9BZG8 443 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 ACSS3Q9H6R3 686 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 SARS2Q9NP81 518 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 STARD5Q9NSY2 213 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 TAAR2Q9P1P5 351 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 GPR34Q9UPC5 381 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
CCDC90B-210ENST00000528149 SNRNP200O75643 2136 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 A0A087WUV0 522 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ENO4A6NNW6 628 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 QSOX1O00391 747 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 SNX2O60749 519 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 AHSGP02765 367 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ESR1P03372 595 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ANXA6P08133 673 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 PKMP14618 531 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 CKMT2P17540 419 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 PREPP48147 710 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 PGGT1BP53609 377 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ERVPABLB-1P60509 514 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 DAB2P98082 770 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 NAB1Q13506 487 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 LRP8Q14114 963 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ZNF658BQ4V348 819 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 PIM3Q86V86 326 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ZC3HC1Q86WB0 502 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 GKN2Q86XP6 184 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 FAM46DQ8NEK8 389 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 SCG3Q8WXD2 468 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ELMO1Q92556 727 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 CAVIN3Q969G5 261 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 CCDC74AQ96AQ1 378 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 VPS39Q96JC1 886 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 ELMO2Q96JJ3 720 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 LINC00615Q96LM1 132 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms