RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 IMP3Q9NV31 184 aaKnown RBP20.26■□□□□ 0.83
CD44-222ENST00000526025 FETUBQ9UGM5 382 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.26■□□□□ 0.83
CD44-222ENST00000526025 TRMT6Q9UJA5 497 aaKnown RBP20.26■□□□□ 0.83
CD44-222ENST00000526025 V9GYY5 206 aaPredicted RBP20.26■□□□□ 0.83
CD44-222ENST00000526025 COL27A1Q8IZC6 1860 aaPredicted RBP20.25■□□□□ 0.83
CD44-222ENST00000526025 TRBV23OR9-2A0A075B6M9 112 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 FAM95CA0A1B0GW59 222 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 RPN2P04844 631 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 GPLD1P80108 840 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 POU4F1Q01851 419 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 SQSTM1Q13501 440 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 BRD3Q15059 726 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 PPM1JQ5JR12 505 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 UBAP2Q5T6F2 1119 aaKnown RBP20.25■□□□□ 0.83
CD44-222ENST00000526025 NAPRTQ6XQN6 538 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 SLCO6A1Q86UG4 719 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 VRK3Q8IV63 474 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 SIDT2Q8NBJ9 832 aaKnown RBP20.25■□□□□ 0.83
CD44-222ENST00000526025 AENQ8WTP8 325 aaKnown RBP20.25■□□□□ 0.83
CD44-222ENST00000526025 SLC38A3Q99624 504 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 CCDC3Q9BQI4 270 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 KIR3DX1Q9H7L2 352 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 RRAGDQ9NQL2 400 aaPredicted RBP20.25■□□□□ 0.83
CD44-222ENST00000526025 GALPQ9UBC7 116 aa20.25■□□□□ 0.83
CD44-222ENST00000526025 CACNA1AO00555 2505 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 DCHS1Q96JQ0 3298 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 TCEA3O75764 348 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 PIAS1O75925 651 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 ABCG1P45844 678 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 CDKN2DP55273 166 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 TBC1D21Q8IYX1 336 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 CACTIN-AS1Q8N1I8 211 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 OR5K2Q8NHB8 316 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 SLC44A1Q8WWI5 657 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 ADAMTS14Q8WXS8 1223 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 ELMO2Q96JJ3 720 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 PARD6BQ9BYG5 372 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 EPB41L4BQ9H329 900 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 POLG2Q9UHN1 485 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 PTPRBP23467 1997 aa20.24■□□□□ 0.83
CD44-222ENST00000526025 NTN3O00634 580 aaPredicted RBP20.23■□□□□ 0.83
CD44-222ENST00000526025 OPA1O60313 960 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 MATN4O95460 622 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 MPC1LP0DKB6 136 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 RGS4P49798 205 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 GPR18Q14330 331 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 EFTUD2Q15029 972 aaKnown RBP eCLIP20.23■□□□□ 0.83
CD44-222ENST00000526025 ACSBG2Q5FVE4 666 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 ACVR1CQ8NER5 493 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 CAVIN3Q969G5 261 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 FAM136AQ96C01 138 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 TSPAN17Q96FV3 270 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 FOPNLQ96NB1 174 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 SLC30A3Q99726 388 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 OLFM1Q99784 485 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 DPYSL5Q9BPU6 564 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 TRIT1Q9H3H1 467 aaKnown RBP20.23■□□□□ 0.83
CD44-222ENST00000526025 ZNF180Q9UJW8 692 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 ASF1AQ9Y294 204 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 CFAP20Q9Y6A4 193 aaKnown RBP20.23■□□□□ 0.83
CD44-222ENST00000526025 KNTC1P50748 2209 aa20.23■□□□□ 0.83
CD44-222ENST00000526025 IGHV1OR21-1A0A087WYE8 117 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 FAM221BA6H8Z2 402 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 KDM1AO60341 852 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 ITGA2BP08514 1039 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 SERPINB9P50453 376 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 PDAP1Q13442 181 aaKnown RBP20.22■□□□□ 0.83
CD44-222ENST00000526025 KRT33BQ14525 404 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 DUS1LQ6P1R4 473 aaKnown RBP20.22■□□□□ 0.83
CD44-222ENST00000526025 ATXN7L3BQ96GX2 97 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 PDLIM5Q96HC4 596 aaKnown RBP20.22■□□□□ 0.83
CD44-222ENST00000526025 LRRN3Q9H3W5 708 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 KCNK4Q9NYG8 393 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 SLC24A2Q9UI40 661 aa20.22■□□□□ 0.83
CD44-222ENST00000526025 SPTBN2O15020 2390 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 B4GAT1O43505 415 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 INHBAP08476 426 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 CNTFP26441 200 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 CCNFP41002 786 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 TAS2R39P59534 338 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 SLC29A2Q14542 456 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 ZKSCAN8Q15776 578 aaPredicted RBP20.21■□□□□ 0.83
CD44-222ENST00000526025 CDCP2Q5VXM1 449 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 PAQR3Q6TCH7 311 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 TAOK1Q7L7X3 1001 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 DGLUCYQ7Z3D6 616 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 CCDC91Q7Z6B0 441 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 PIM3Q86V86 326 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 RASGRP3Q8IV61 690 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 DCUN1D3Q8IWE4 304 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 FBXO15Q8NCQ5 510 aaPredicted RBP20.21■□□□□ 0.83
CD44-222ENST00000526025 OR10G6Q8NH81 332 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 ANKRD7Q92527 254 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 FERD3LQ96RJ6 166 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 PAFAH2Q99487 392 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 DHRS4Q9BTZ2 278 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 ABCG4Q9H172 646 aa20.21■□□□□ 0.83
CD44-222ENST00000526025 TFB2MQ9H5Q4 396 aaKnown RBP20.21■□□□□ 0.83
CD44-222ENST00000526025 PPCSQ9HAB8 311 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms