RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TTC25Q96NG3 672 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 IL17FQ96PD4 163 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 CYTH2Q99418 400 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 CPNE1Q99829 537 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 TIMM29Q9BSF4 260 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 SLC13A1Q9BZW2 595 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 RMI1Q9H9A7 625 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 LATS2Q9NRM7 1088 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 TRNAU1APQ9NX07 287 aaKnown RBP6.34□□□□□ -1.39
CD44-214ENST00000525211 SPASTQ9UBP0 616 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 TBK1Q9UHD2 729 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 GNPTGQ9UJJ9 305 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 ADAMTS6Q9UKP5 1117 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 GPR34Q9UPC5 381 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 VWA7Q9Y334 891 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 DHRS7Q9Y394 339 aa6.34□□□□□ -1.39
CD44-214ENST00000525211 ZFC3H1O60293 1989 aaKnown RBP6.34□□□□□ -1.39
CD44-214ENST00000525211 GOLGA4Q13439 2230 aaKnown RBP6.34□□□□□ -1.39
CD44-214ENST00000525211 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 BAHCC1Q9P281 2608 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 RP1P56715 2156 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ZNF292O60281 2723 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CEP250Q9BV73 2442 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 EXOC1LA0A1B0GW35 172 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 TLDC2A0PJX2 215 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CCDC151A5D8V7 595 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 GOLGA8RI6L899 631 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CDC7O00311 574 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 TPP1O14773 563 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PCDHGA12O60330 932 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 SPAG6O75602 509 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 RFPL1O75677 317 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 SLCO2B1O94956 709 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ESR1P03372 595 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 SYPP08247 313 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 NUDT17P0C025 328 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 OR56A5P0C7T3 313 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 SLC35E2BP0CK96 405 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CTSEP14091 401 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 KELP23276 732 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 MAGEA12P43365 314 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CCT8P50990 548 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PPP1CAP62136 330 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 UBE2IP63279 158 aaKnown RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 YBX1P67809 324 aaKnown RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 TUBB4BP68371 445 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CFHR1Q03591 330 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PRKG2Q13237 762 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 GTF2H3Q13889 308 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 COL9A2Q14055 689 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 USP10Q14694 798 aaKnown RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 TMED2Q15363 201 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ZKSCAN8Q15776 578 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 KLHL38Q2WGJ6 581 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 C18orf21Q32NC0 220 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 FBXO48Q5FWF7 155 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 AARS2Q5JTZ9 985 aaKnown RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 GRTP1Q5TC63 336 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 C16orf46Q6P387 395 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ABRAXAS1Q6UWZ7 409 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CDHR3Q6ZTQ4 885 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 LRRC6Q86X45 466 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CENPLQ8N0S6 344 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 ARL14Q8N4G2 192 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 C2orf73Q8N5S3 287 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 ZBTB2Q8N680 514 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 DEFB124Q8NES8 71 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 OR4C6Q8NH72 309 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CFAP61Q8NHU2 1237 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
CD44-214ENST00000525211 HM13Q8TCT9 377 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ZDHHC1Q8WTX9 485 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 KCTD4Q8WVF5 259 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PTERQ96BW5 349 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 NXNL1Q96CM4 212 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ITPKCQ96DU7 683 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 APOLD1Q96LR9 279 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PPM1MQ96MI6 270 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 GPR78Q96P69 363 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 TBC1D10AQ9BXI6 508 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 DPEP2Q9H4A9 486 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 XKR8Q9H6D3 395 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 TMEM9BQ9NQ34 198 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 ACSS2Q9NR19 701 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 SNX15Q9NRS6 342 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 IGSF5Q9NSI5 407 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 TOR4AQ9NXH8 423 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 OGFRQ9NZT2 677 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PCOLCE2Q9UKZ9 415 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 RNF215Q9Y6U7 377 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 CACNA1BQ00975 2339 aa6.33□□□□□ -1.4
CD44-214ENST00000525211 C17orf113A0A1B0GUU1 675 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 SPAARA0A1B0GVQ0 90 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 NPEPPSL1A6NEC2 478 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 LRRC14BA6NHZ5 514 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 PDZK1P1A8MUH7 402 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms