RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ZW10O43264 779 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 KIF1CO43896 1103 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 NIPSNAP2O75323 286 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 HAUS5O94927 633 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 ESR1P03372 595 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 FGF3P11487 239 aaPredicted RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 CCL4P13236 92 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 HGFP14210 728 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 PKMP14618 531 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 CAPZBP47756 277 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 LEPRP48357 1165 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 CLCN7P51798 805 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 EIF3BP55884 814 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 GABREP78334 506 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 MPP1Q00013 466 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 CKAP4Q07065 602 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 BIRC2Q13490 618 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 TUBB2AQ13885 445 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 C3orf38Q5JPI3 329 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 TEDDM1Q5T9Z0 273 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 RNF187Q5TA31 235 aaPredicted RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 CNSTQ6PJW8 725 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 RAB11FIP2Q7L804 512 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 CLEC14AQ86T13 490 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 KCNMB4Q86W47 210 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 RCBTB1Q8NDN9 531 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 OR5AR1Q8NGP9 310 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 FBXO25Q8TCJ0 367 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 C9orf72Q96LT7 481 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 MCMBPQ9BTE3 642 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 TUBB2BQ9BVA1 445 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 TFB2MQ9H5Q4 396 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 MVB12BQ9H7P6 319 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 FBXO6Q9NRD1 293 aaPredicted RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 IARS2Q9NSE4 1012 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 ZDHHC18Q9NUE0 388 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 SLC17A6Q9P2U8 582 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
CLN8-207ENST00000524258 GNPTGQ9UJJ9 305 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 CHMP2BQ9UQN3 213 aa11.64□□□□□ -0.55
CLN8-207ENST00000524258 ITPR1Q14643 2758 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 UBA6A0AVT1 1052 aaPredicted RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 CAPN5O15484 640 aaPredicted RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 AHSGP02765 367 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ITIH1P19827 911 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 NDUFS1P28331 727 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 MLLT3P42568 568 aaPredicted RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 GUCY2DQ02846 1103 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 HSPA14Q0VDF9 509 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 PDIA2Q13087 525 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 THOC5Q13769 683 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 TBC1D25Q3MII6 688 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 PLEKHS1Q5SXH7 462 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 PHF19Q5T6S3 580 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 PTRHD1Q6GMV3 140 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 GALNT7Q86SF2 657 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ANKMY2Q8IV38 441 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 FBXO39Q8N4B4 442 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 BBOF1Q8ND07 529 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 FBXO36Q8NEA4 188 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ACVR1CQ8NER5 493 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 OR52E1Q8NGJ3 308 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 FLVCR1-AS1Q8TAF5 88 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ASZ1Q8WWH4 475 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ZCCHC14Q8WYQ9 949 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 KLHL6Q8WZ60 621 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 PMEPA1Q969W9 287 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 TRIM44Q96DX7 344 aaPredicted RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 CERS2Q96G23 380 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 FAM167BQ9BTA0 163 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 PHACTR1Q9C0D0 580 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 STRADBQ9C0K7 418 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 SMYD2Q9NRG4 433 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 OCIAD1Q9NX40 245 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 SIDT1Q9NXL6 827 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 KLHL42Q9P2K6 505 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 ZC3H7BQ9UGR2 993 aaKnown RBP11.63□□□□□ -0.55
CLN8-207ENST00000524258 ZMIZ1Q9ULJ6 1067 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 LOXL2Q9Y4K0 774 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 HEBP2Q9Y5Z4 205 aa11.63□□□□□ -0.55
CLN8-207ENST00000524258 CACNA1BQ00975 2339 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 ESYT3A0FGR9 886 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 OR5K3A6NET4 321 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 C9orf172C9J069 976 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 H3BMM5 538 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 BTN3A3O00478 584 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 EIF3HO15372 352 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLN8-207ENST00000524258 ITGA2BP08514 1039 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 MAPK9P45984 424 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 PLTPP55058 493 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 CSE1LP55060 971 aaKnown RBP11.62□□□□□ -0.55
CLN8-207ENST00000524258 GPX6P59796 221 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 ERVPABLB-1P60509 514 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms