RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SMG6Q86US8 1419 aaKnown RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 TMEM8BA6NDV4 472 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 PLPP2O43688 288 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 BUD23O43709 281 aaKnown RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 TSPAN9O75954 239 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 KCNA5P22460 613 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 HRH2P25021 359 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 CTSCP53634 463 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 TERF1P54274 439 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 MRPS5P82675 430 aaKnown RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 RUNX1T1Q06455 604 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 ITPK1Q13572 414 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 ACCSLQ4AC99 568 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 RAB41Q5JT25 222 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 PLEKHM3Q6ZWE6 761 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 FASTKD5Q7L8L6 764 aaKnown RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 SZRD1Q7Z422 152 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 DSG4Q86SJ6 1040 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 SLC9B2Q86UD5 537 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 NR2C2APQ86WQ0 139 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 MCEMP1Q8IX19 187 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 METTL27Q8N6F8 245 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 PPP4R1Q8TF05 950 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 DACH2Q96NX9 599 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 LRRC1Q9BTT6 524 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 LRMDAQ9H2I8 198 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 SUCLA2Q9P2R7 463 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 TBC1D29Q9UFV1 150 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 ARFGEF2Q9Y6D5 1785 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 CEP290O15078 2479 aa5.67□□□□□ -1.5
CPNE3-206ENST00000523469 KTN1Q86UP2 1357 aaKnown RBP5.67□□□□□ -1.5
CPNE3-206ENST00000523469 PAPPA2Q9BXP8 1791 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 OR5K3A6NET4 321 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 ANKRD66B4E2M5 251 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 C16orf97H3BN30 126 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.5
CPNE3-206ENST00000523469 CETPP11597 493 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 ZNF23P17027 643 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 MMP14P50281 582 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 MFAP4P55083 255 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 SPOCK1Q08629 439 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 ACVR2BQ13705 512 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 Q75L30 129 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 SCYL3Q8IZE3 742 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 PHF21AQ96BD5 680 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 SAT2Q96F10 170 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-206ENST00000523469 GFI1Q99684 422 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 PAG1Q9NWQ8 432 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 POLG2Q9UHN1 485 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 GPR34Q9UPC5 381 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 RNF123Q5XPI4 1314 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 ZNF831Q5JPB2 1677 aa5.66□□□□□ -1.5
CPNE3-206ENST00000523469 NRXN2Q9P2S2 1712 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 RBBP6Q7Z6E9 1792 aaKnown RBP5.65□□□□□ -1.5
CPNE3-206ENST00000523469 ANKRD31Q8N7Z5 1873 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 IFITM10A6NMD0 228 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 BMPR1BO00238 502 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 ZBTB43O43298 467 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 MITFO75030 526 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-206ENST00000523469 ZNF217O75362 1048 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 GH2P01242 217 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 FMO5P49326 533 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 ARL16Q0P5N6 197 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 CHAF1BQ13112 559 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 CUL4AQ13619 759 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 KCNC3Q14003 757 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 WTAPQ15007 396 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 MEP1AQ16819 746 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 RILPL1Q5EBL4 403 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 STXBP5Q5T5C0 1151 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 ZDHHC20Q5W0Z9 365 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 FAM171BQ6P995 826 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 GDPD4Q6W3E5 623 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 RAD9BQ6WBX8 426 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 PIGBQ92521 554 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 HRH4Q9H3N8 390 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 RAD21L1Q9H4I0 556 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 TMOD3Q9NYL9 352 aa5.65□□□□□ -1.5
CPNE3-206ENST00000523469 RCC2Q9P258 522 aaKnown RBP5.65□□□□□ -1.5
CPNE3-206ENST00000523469 ADD3Q9UEY8 706 aaKnown RBP5.65□□□□□ -1.5
CPNE3-206ENST00000523469 SEC63Q9UGP8 760 aaKnown RBP5.65□□□□□ -1.5
CPNE3-206ENST00000523469 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.65□□□□□ -1.5
CPNE3-206ENST00000523469 CNTNAP2Q9UHC6 1331 aa5.65□□□□□ -1.51
CPNE3-206ENST00000523469 CD163L1Q9NR16 1453 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 A0A1W2PR77 199 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CTAGE9A4FU28 777 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 LRRC72A6NJI9 287 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 B4DLN1 442 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 H0YIN7 160 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 ZNF432O94892 652 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CTAGE8P0CG41 777 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CSH1P0DML2 217 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CSH2P0DML3 217 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 GM2AP17900 193 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 AHRP35869 848 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 ARCN1P48444 511 aaKnown RBP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 MRPL12P52815 198 aaKnown RBP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 MLLT10P55197 1068 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 EPS8Q12929 822 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms