RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 KRT33BQ14525 404 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 MORF4L2Q15014 288 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 TRADDQ15628 312 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 TMEM266Q2M3C6 531 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 KRBOX4Q5JUW0 171 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 C9orf57Q5W0N0 161 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 ZNF324BQ6AW86 544 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 PRSS57Q6UWY2 283 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 GFRALQ6UXV0 394 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
SKP1-211ENST00000523359 TPRG1Q6ZUI0 275 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 PLEKHM3Q6ZWE6 761 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 TMPRSS12Q86WS5 348 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 SFR1Q86XK3 245 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 MAML2Q8IZL2 1156 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 TMCO5AQ8N6Q1 288 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 RBMXL3Q8N7X1 1067 aaKnown RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 CTCFLQ8NI51 663 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 GRK7Q8WTQ7 553 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 DEPDC1BQ8WUY9 529 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 SEPT1Q8WYJ6 367 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 CDCA5Q96FF9 252 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 VPS39Q96JC1 886 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 ABHD1Q96SE0 405 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 CSTL1Q9H114 145 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 C6orf106Q9H6K1 298 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 SERINC1Q9NRX5 453 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 KLHL9Q9P2J3 617 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 ZNF624Q9P2J8 865 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 ZMAT5Q9UDW3 170 aaKnown RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 OR2W1Q9Y3N9 320 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 KIF3AQ9Y496 699 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 ANGPTL3Q9Y5C1 460 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 SMCHD1A6NHR9 2005 aa4.78□□□□□ -1.64
SKP1-211ENST00000523359 GREB1LQ9C091 1923 aaPredicted RBP4.78□□□□□ -1.64
SKP1-211ENST00000523359 SPAG9O60271 1321 aaKnown RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 ZNF644Q9H582 1327 aaPredicted RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 LOC102723996A0A087X1L8 192 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 MAGEA13PA6NCF6 341 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 LILRA5A6NI73 299 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 C4orf47A7E2U8 309 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 TMEM189-UBE2V1I3L0A0 370 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 K7EPI3 171 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 M0QX08 132 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 CACNB4O00305 520 aaPredicted RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 PSMD14O00487 310 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 KINO60870 393 aaKnown RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 KERAO60938 352 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 OLFM2O95897 454 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 HEXBP07686 556 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 POLR2CP19387 275 aaPredicted RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 CXCL9Q07325 125 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 AIMP1Q12904 312 aaKnown RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 ZBTB17Q13105 803 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 UBE2V1Q13404 147 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 KEAP1Q14145 624 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 IZUMO4Q1ZYL8 232 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 GARNL3Q5VVW2 1013 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 KRT79Q5XKE5 535 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 RAD9BQ6WBX8 426 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 DNAAF5Q86Y56 855 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 SLC5A8Q8N695 610 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 GCSAMQ8N6F7 178 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 BBS10Q8TAM1 723 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 ANKRD49Q8WVL7 239 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 KRT35Q92764 455 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 GCNAQ96QF7 691 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 C1QTNF4Q9BXJ3 329 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 RTN4RQ9BZR6 473 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 KLHL4Q9C0H6 718 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 C1orf21Q9H246 121 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 COPS7BQ9H9Q2 264 aaPredicted RBP4.77□□□□□ -1.65
SKP1-211ENST00000523359 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.77□□□□□ -1.65
SKP1-211ENST00000523359 PSD3Q9NYI0 1048 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 TAS2R14Q9NYV8 317 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 TAS2R3Q9NYW6 316 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 SELENONQ9NZV5 590 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 CACNG4Q9UBN1 327 aa4.77□□□□□ -1.65
SKP1-211ENST00000523359 PLSCR5A0PG75 271 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 GLOD5A6NK44 160 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 CCDC169A6NNP5 214 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 LDB3O75112 727 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 RTN2O75298 545 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 KCNA5P22460 613 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 NMBRP28336 390 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 USP8P40818 1118 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 ASMTP46597 345 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 AMPHP49418 695 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 YWHAHQ04917 246 aaPredicted RBP4.76□□□□□ -1.65
SKP1-211ENST00000523359 RUNX1T1Q06455 604 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 GRAPQ13588 217 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 LASP1Q14847 261 aaKnown RBP4.76□□□□□ -1.65
SKP1-211ENST00000523359 C15orf59Q2T9L4 293 aaPredicted RBP4.76□□□□□ -1.65
SKP1-211ENST00000523359 FAM98BQ52LJ0 330 aaKnown RBP4.76□□□□□ -1.65
SKP1-211ENST00000523359 TMEM35AQ53FP2 167 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 CAVIN4Q5BKX8 364 aa4.76□□□□□ -1.65
SKP1-211ENST00000523359 ZDHHC20Q5W0Z9 365 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms