RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 KCNJ13O60928 360 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 CSN3P07498 182 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 FAM106CPP0CH98 169 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 FGF3P11487 239 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 TCF4P15884 667 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 CD22P20273 847 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 CDC25CP30307 473 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 MTHFRP42898 656 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 MMP15P51511 669 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 POLR2LP62875 67 aaKnown RBP4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 XKR9Q5GH70 373 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 NADSYN1Q6IA69 706 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 C18orf65Q6ZTR6 163 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 ASB18Q6ZVZ8 466 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 TMPRSS12Q86WS5 348 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 GRAPLQ8TC17 118 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 SLAMF9Q96A28 289 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 LMLNQ96KR4 655 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 FNBP1Q96RU3 617 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 CPNE1Q99829 537 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 SLX1AQ9BQ83 275 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 SEMA6AQ9H2E6 1030 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 ARRDC1-AS1Q9H2J1 176 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 EBF2Q9HAK2 575 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 CD93Q9NPY3 652 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 NFS1Q9Y697 457 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 POMT1Q9Y6A1 747 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 HEG1Q9ULI3 1381 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 A4D1N5 150 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 DNM1LO00429 736 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 ACOT8O14734 319 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 WDR46O15213 610 aaKnown RBP4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 SLC16A5O15375 505 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 FMO6PO60774 539 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 CAMTA2O94983 1202 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 PMS2P2O95744 297 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 FAM58BPP0C7Q3 252 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 ITGA2P17301 1181 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 PTPN3P26045 913 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 HSPA4P34932 840 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 COG7P83436 770 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 SLC20A2Q08357 652 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 MZT1Q08AG7 82 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 KIF5AQ12840 1032 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 TRNP1Q6NT89 227 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 TMPRSS11FQ6ZWK6 438 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 MAP7D3Q8IWC1 876 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 LNX1Q8TBB1 728 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 SETD6Q8TBK2 473 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 ZFAND2BQ8WV99 257 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 GBP5Q96PP8 586 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 CSTL1Q9H114 145 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 TBC1D17Q9HA65 648 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 PFDN4Q9NQP4 134 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 LRWD1Q9UFC0 647 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 OR2W1Q9Y3N9 320 aa4.45□□□□□ -1.7
HMGB1P1-201ENST00000522557 IGLV5-37A0A075B6J1 123 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ANKRD66B4E2M5 251 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 CLDN4O14493 209 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ZBTB43O43298 467 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 BUD23O43709 281 aaKnown RBP4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 GPR137BO60478 399 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 GBAP04062 536 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 PRSS2P07478 247 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 OAS2P29728 719 aaKnown RBP4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 LHX1P48742 406 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ASCL1P50553 236 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 PDE1BQ01064 536 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ILF3Q12906 894 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 DLG1Q12959 904 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 MYBPHQ13203 477 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ITGA7Q13683 1181 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 SLMAPQ14BN4 828 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 CALCRLQ16602 461 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 PLXDC2Q6UX71 529 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 C15orf39Q6ZRI6 1047 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 OTOAQ7RTW8 1153 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 SNX32Q86XE0 403 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ODF3L1Q8IXM7 274 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 TIGD4Q8IY51 512 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 RNF113BQ8IZP6 322 aaKnown RBP4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 TMEM255BQ8WV15 326 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ATP6V1E2Q96A05 226 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 PHF21AQ96BD5 680 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 FAM81BQ96LP2 452 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 C3orf30Q96M34 536 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 SPATA33Q96N06 139 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 DOCK7Q96N67 2140 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ZNF558Q96NG5 402 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 ZNF385AQ96PM9 386 aaKnown RBP4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 LMF2Q9BU23 707 aaKnown RBP4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 SLC24A2Q9UI40 661 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 CDH7Q9ULB5 785 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 YIPF1Q9Y548 306 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 IGSF1Q8N6C5 1336 aa4.44□□□□□ -1.7
HMGB1P1-201ENST00000522557 IFITM10A6NMD0 228 aa4.43□□□□□ -1.7
HMGB1P1-201ENST00000522557 PRR32B1ATL7 298 aa4.43□□□□□ -1.7
HMGB1P1-201ENST00000522557 H0YAE9 185 aa4.43□□□□□ -1.7
HMGB1P1-201ENST00000522557 IFIT3O14879 490 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms