RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TMEM135Q86UB9 458 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 BPHLQ86WA6 291 aaPredicted RBP20.12■□□□□ 0.81
SDCBP-209ENST00000522243 GLIS1Q8NBF1 620 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 APOBEC4Q8WW27 367 aaKnown RBP20.12■□□□□ 0.81
SDCBP-209ENST00000522243 TFGQ92734 400 aaPredicted RBP20.12■□□□□ 0.81
SDCBP-209ENST00000522243 FCRL4Q96PJ5 515 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 HGH1Q9BTY7 390 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 TLR10Q9BXR5 811 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 XKR8Q9H6D3 395 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 RAB6BQ9NRW1 208 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 SLC2A6Q9UGQ3 507 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 POMT2Q9UKY4 750 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 CDC14CA4D256 554 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 BTN3A1O00481 513 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 AP2A2O94973 939 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 GAS8O95995 478 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 NSG1P42857 185 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 CD151P48509 253 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 TUBB4BP68371 445 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 TUBB2AQ13885 445 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 RPS6KA1Q15418 735 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 CRTC2Q53ET0 693 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-209ENST00000522243 MEI1Q5TIA1 1274 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 PRAMEF17Q5VTA0 474 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 TMEM126BQ8IUX1 230 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 ELMO1Q92556 727 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 HDAC10Q969S8 669 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 ZNF501Q96CX3 271 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-209ENST00000522243 TUBB2BQ9BVA1 445 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 FRMD8P1Q9BZ68 369 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-209ENST00000522243 KLHL25Q9H0H3 589 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 MVB12BQ9H7P6 319 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 KCND1Q9NSA2 647 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 TUBD1Q9UJT1 453 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 KCND3Q9UK17 655 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 BTRCQ9Y297 605 aa20.11■□□□□ 0.81
SDCBP-209ENST00000522243 PIPSLA2A3N6 862 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 HEATR9A2RTY3 570 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 ERI2A8K979 691 aaKnown RBP20.1■□□□□ 0.81
SDCBP-209ENST00000522243 CREG1O75629 220 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 SCRG1O75711 98 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 SUN1O94901 812 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 WISP1O95388 367 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 GOT2P00505 430 aaKnown RBP20.1■□□□□ 0.81
SDCBP-209ENST00000522243 ZSCAN5DPP0CG00 497 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 PSMA3P25788 255 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 PRDX3P30048 256 aaKnown RBP20.1■□□□□ 0.81
SDCBP-209ENST00000522243 RPA4Q13156 261 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 ITIH4Q14624 930 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 TSTD2Q5T7W7 516 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 OR13J1Q8NGT2 312 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 C9orf43Q8TAL5 461 aaPredicted RBP20.1■□□□□ 0.81
SDCBP-209ENST00000522243 ABHD17AQ96GS6 310 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 ZNF778Q96MU6 729 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 TWSG1Q9GZX9 223 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 TFB2MQ9H5Q4 396 aaKnown RBP20.1■□□□□ 0.81
SDCBP-209ENST00000522243 C1GALT1Q9NS00 363 aa20.1■□□□□ 0.81
SDCBP-209ENST00000522243 CFAP46Q8IYW2 2715 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 OR1I1O60431 355 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 PVRP15151 417 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 ST6GAL1P15907 406 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 GSDMDP57764 484 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 RPS18P62269 152 aaKnown RBP20.09■□□□□ 0.81
SDCBP-209ENST00000522243 KCNC4Q03721 635 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 GPS2Q13227 327 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 SEMA5AQ13591 1074 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 BOP1Q14137 746 aaKnown RBP20.09■□□□□ 0.81
SDCBP-209ENST00000522243 AMIGO1Q86WK6 493 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 CARFQ8N187 725 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 CCDC89Q8N998 374 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 OR5AR1Q8NGP9 310 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 MR1Q95460 341 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDCBP-209ENST00000522243 LZTFL1Q9NQ48 299 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 CASS4Q9NQ75 786 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 POLHQ9Y253 713 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 PCDHGA6Q9Y5G7 932 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 KCNMB2Q9Y691 235 aa20.09■□□□□ 0.81
SDCBP-209ENST00000522243 MATN2O00339 956 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 LIN7AO14910 233 aaPredicted RBP20.08■□□□□ 0.81
SDCBP-209ENST00000522243 ARHGAP6O43182 974 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 CPNE3O75131 537 aaKnown RBP20.08■□□□□ 0.81
SDCBP-209ENST00000522243 FTH1P02794 183 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 APRTP07741 180 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 GSTM1P09488 218 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 ADRA1DP25100 572 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 CSE1LP55060 971 aaKnown RBP20.08■□□□□ 0.81
SDCBP-209ENST00000522243 GSTM4Q03013 218 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 SIX1Q15475 284 aaPredicted RBP20.08■□□□□ 0.81
SDCBP-209ENST00000522243 KCTD19Q17RG1 926 aaPredicted RBP20.08■□□□□ 0.81
SDCBP-209ENST00000522243 AFTPHQ6ULP2 937 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 PACS1Q6VY07 963 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 ADGRF3Q8IZF5 1079 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 SLC38A9Q8NBW4 561 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 OR6P1Q8NGX9 317 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 RANBP9Q96S59 729 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 ACTL8Q9H568 366 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 CLMPQ9H6B4 373 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 ACTR10Q9NZ32 417 aa20.08■□□□□ 0.81
SDCBP-209ENST00000522243 PAK5Q9P286 719 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms