RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	KERA	O60938	352 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LDLR	P01130	860 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SLPI	P03973	132 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RLN1	P04808	185 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMEM191B	P0C7N4	346 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PLA2G4B	P0C869	781 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TIA1	P31483	386 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SOAT1	P35610	550 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	WNT5A	P41221	380 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PTEN	P60484	403 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	STX1B	P61266	288 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PNRC1	Q12796	327 aa	Predicted RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DHX34	Q14147	1143 aa	Known RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RABEP1	Q15276	862 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PKN2	Q16513	984 aa	Known RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TDRD12	Q587J7	1177 aa	Known RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LCE4A	Q5TA78	99 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	GRTP1	Q5TC63	336 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MFSD12	Q6NUT3	480 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TATDN1	Q6P1N9	297 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	COLCA1	Q6ZS62	124 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DGLUCY	Q7Z3D6	616 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SLC16A11	Q8NCK7	471 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	OR7G3	Q8NG95	312 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	OR5M8	Q8NGP6	311 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SLC38A5	Q8WUX1	472 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RAD54L	Q92698	747 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ST6GALNAC6	Q969X2	333 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PDLIM5	Q96HC4	596 aa	Known RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM84B	Q96KN1	310 aa	Predicted RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KRTAP4-11	Q9BYQ6	195 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DCLK3	Q9C098	648 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RBM38	Q9H0Z9	239 aa	Known RBP	4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LRMDA	Q9H2I8	198 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	POT1	Q9NUX5	634 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CNIH4	Q9P003	139 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	VPS18	Q9P253	973 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	YIPF1	Q9Y548	306 aa		4.82	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SYNJ2	O15056	1496 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052		A0A1W2PRV1	198 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ELOVL7	A1L3X0	281 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	OR5K3	A6NET4	321 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	NEMP2	A6NFY4	417 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	C15orf62	A8K5M9	175 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	YDJC	A8MPS7	323 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ANKRD66	B4E2M5	251 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMEM178B	H3BS89	294 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	GPR137B	O60478	399 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RTN2	O75298	545 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	WISP2	O76076	250 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ACSL3	O95573	720 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PNP	P00491	289 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	IGHV2-70	P01814	119 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CSN3	P07498	182 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SAG	P10523	405 aa	Predicted RBP	4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TNFRSF8	P28908	595 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CASP3	P42574	277 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KCNJ1	P48048	391 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MAPK12	P53778	367 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SNU13	P55769	128 aa	Known RBP	4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	UBASH3A	P57075	661 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052		Q0VFX4	171 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM174B	Q3ZCQ3	159 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TCTE1	Q5JU00	501 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CCDC158	Q5M9N0	1113 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM122C	Q6P4D5	195 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SLC27A1	Q6PCB7	646 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ENPP7	Q6UWV6	458 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DBX2	Q6ZNG2	339 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PIM3	Q86V86	326 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	C4orf19	Q8IY42	314 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	NDUFAF2	Q8N183	169 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	UXS1	Q8NBZ7	420 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DBF4B	Q8NFT6	615 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ATP6V0A1	Q93050	837 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	C3orf30	Q96M34	536 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SPATA33	Q96N06	139 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ATP6V0B	Q99437	205 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	BTBD10	Q9BSF8	475 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PI4K2A	Q9BTU6	479 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	GTPBP2	Q9BX10	602 aa	Known RBP	4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ZNF350	Q9GZX5	532 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SPRTN	Q9H040	489 aa	Predicted RBP	4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MINDY3	Q9H8M7	445 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LMAN1L	Q9HAT1	526 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MIOS	Q9NXC5	875 aa		4.81	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LINC01553	A4QN01	128 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM90A10P	A6NDY2	464 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LILRA5	A6NI73	299 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MID1	O15344	667 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	EIF3D	O15371	548 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ST8SIA3	O43173	380 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SELENOF	O60613	162 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PGLS	O95336	258 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	BMP10	O95393	424 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	GCNT3	O95395	438 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMPO	P42166	694 aa	Known RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CLK1	P49759	484 aa	Known RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	GMPS	P49915	693 aa	Predicted RBP	4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms