RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ACKR4Q9NPB9 350 aa4.8□□□□□ -1.64
SKP1-208ENST00000521216 ECHDC1Q9NTX5 307 aa4.8□□□□□ -1.64
SKP1-208ENST00000521216 CLIC5Q9NZA1 410 aa4.8□□□□□ -1.64
SKP1-208ENST00000521216 HYKKA2RU49 373 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 PSMD10O75832 226 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 TRUB2O95900 331 aaKnown RBP4.79□□□□□ -1.64
SKP1-208ENST00000521216 DNTTP04053 509 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 DMPKQ09013 629 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 IL11RAQ14626 422 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 MDH1BQ5I0G3 518 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 WDR38Q5JTN6 314 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 C9orf152Q5JTZ5 239 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 RNASEH2BQ5TBB1 312 aaKnown RBP4.79□□□□□ -1.64
SKP1-208ENST00000521216 SFMBT2Q5VUG0 894 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 TMPRSS11FQ6ZWK6 438 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 CAMKMTQ7Z624 323 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 ZNF595Q8IYB9 648 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 CFAP206Q8IYR0 622 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 STPG4Q8N801 248 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 LSMEM1Q8N8F7 131 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
SKP1-208ENST00000521216 TSPAN14Q8NG11 270 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 RNF128Q8TEB7 428 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 TM9SF4Q92544 642 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 MYADMQ96S97 322 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 RHNO1Q9BSD3 238 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 LMF2Q9BU23 707 aaKnown RBP4.79□□□□□ -1.64
SKP1-208ENST00000521216 EQTNQ9NQ60 294 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.79□□□□□ -1.64
SKP1-208ENST00000521216 STK26Q9P289 416 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 DDX25Q9UHL0 483 aaKnown RBP4.79□□□□□ -1.64
SKP1-208ENST00000521216 ZNF112Q9UJU3 913 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 SLC7A7Q9UM01 511 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 GRIP1Q9Y3R0 1128 aa4.79□□□□□ -1.64
SKP1-208ENST00000521216 FLT1P17948 1338 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 ZNF541Q9H0D2 1346 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 A0A1W2PRB8 838 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 CLIC2O15247 247 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 GRID2O43424 1007 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 DIAPH2O60879 1101 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 IL11P20809 199 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 SLC9A3P48764 834 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 PNRC1Q12796 327 aaPredicted RBP4.78□□□□□ -1.64
SKP1-208ENST00000521216 SNTB1Q13884 538 aaKnown RBP4.78□□□□□ -1.64
SKP1-208ENST00000521216 RASA2Q15283 850 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 TECRLQ5HYJ1 363 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 C9orf50Q5SZB4 431 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 GRTP1Q5TC63 336 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 SLC30A6Q6NXT4 461 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 CEACAM20Q6UY09 585 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 MEX3BQ6ZN04 569 aaKnown RBP4.78□□□□□ -1.64
SKP1-208ENST00000521216 USP43Q70EL4 1123 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 FOXP4Q8IVH2 680 aaPredicted RBP4.78□□□□□ -1.64
SKP1-208ENST00000521216 CPSF7Q8N684 471 aaKnown RBP4.78□□□□□ -1.64
SKP1-208ENST00000521216 PPFIBP2Q8ND30 876 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 KLHDC9Q8NEP7 349 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 OR10S1Q8NGN2 331 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 MOSPD2Q8NHP6 518 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 ZNF830Q96NB3 372 aaPredicted RBP4.78□□□□□ -1.64
SKP1-208ENST00000521216 DPP3Q9NY33 737 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 BCCIPQ9P287 314 aaKnown RBP eCLIP4.78□□□□□ -1.64
SKP1-208ENST00000521216 SLC24A2Q9UI40 661 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 ANAPC2Q9UJX6 822 aa4.78□□□□□ -1.64
SKP1-208ENST00000521216 NOTCH4Q99466 2003 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 TADA2AO75478 443 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 CSPG5O95196 566 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 HSP90AA1P07900 732 aaKnown RBP4.77□□□□□ -1.65
SKP1-208ENST00000521216 OR2T7P0C7T2 308 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 PAX1P15863 534 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 DCTP40126 519 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 NR2C2P49116 596 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 CCR3P51677 355 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 ZNF75DP51815 510 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 HSPB3Q12988 150 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 ALCAMQ13740 583 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 ERMARDQ5T6L9 678 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 PLA2G4FQ68DD2 849 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 SLC35E4Q6ICL7 350 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 MARK2Q7KZI7 788 aaKnown RBP4.77□□□□□ -1.65
SKP1-208ENST00000521216 PLPPR4Q7Z2D5 763 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 PLD3Q8IV08 490 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 TC2NQ8N9U0 490 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 TMEM143Q96AN5 459 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 SPDL1Q96EA4 605 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 NSL1Q96IY1 281 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 SFXN2Q96NB2 322 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 RTP3Q9BQQ7 232 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 TXLNGYQ9BZA5 131 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 OLAHQ9NV23 265 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 TUBE1Q9UJT0 475 aa4.77□□□□□ -1.65
SKP1-208ENST00000521216 A0A087WYN8 130 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 TRBC2A0A5B9 178 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 E9PI62 339 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 FGF5P12034 268 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 CX3CL1P78423 397 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 ZNF554Q86TJ5 538 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 CEP57L1Q8IYX8 460 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 ARHGAP24Q8N264 748 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms