RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SFRP1Q8N474 314 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 OR2T11Q8NH01 316 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ASZ1Q8WWH4 475 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 NUSAP1Q9BXS6 441 aaKnown RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 LMCD1Q9NZU5 365 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 PDP2Q9P2J9 529 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 PRKAB1Q9Y478 270 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 A0A1W2PP18 115 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 BBIP1A8MTZ0 92 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 E2F3O00716 465 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ATP1B2P14415 290 aaPredicted RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 PPM1FP49593 454 aaPredicted RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 GSK3BP49841 420 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 SUOXP51687 545 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 CHIT1Q13231 466 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 GTF2H3Q13889 308 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ZIK1Q3SY52 487 aaPredicted RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 ARMC3Q5W041 872 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 CFAP206Q8IYR0 622 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 SLC22A15Q8IZD6 547 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 FOXJ1Q92949 421 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ROPN1LQ96C74 230 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ZNF382Q96SR6 550 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 CD244Q9BZW8 370 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 BAG5Q9UL15 447 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ERVW-1Q9UQF0 538 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 TDRKHQ9Y2W6 561 aaKnown RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 C15orf38-AP3S2A0A0A6YYH1 394 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 GNG14A0A1W2PPG7 69 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CARNS1A5YM72 827 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 ZNF197O14709 1029 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SCAMP1O15126 338 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 TSPAN12O95859 305 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SERPIND1P05546 499 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 ABCB1P08183 1280 aaPredicted RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 ETS2P15036 469 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 ATP6V1B2P21281 511 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CCR7P32248 378 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 S100A3P33764 101 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 GJA8P48165 433 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SPINT3P49223 89 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 ACADVLP49748 655 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 PTSQ03393 145 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 FBXO46Q6PJ61 603 aaPredicted RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 LMNTD1Q8N9Z9 388 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 MAGEE2Q8TD90 523 aaPredicted RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 INVSQ9Y283 1065 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 NUP214P35658 2090 aaPredicted RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 GREB1Q4ZG55 1949 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 MIA3Q5JRA6 1907 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 WASH3PC4AMC7 463 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 FZD6O60353 706 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CEBPBP17676 345 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 RHDQ02161 417 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 GLYATQ6IB77 296 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SBSNQ6UWP8 590 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CHSY3Q70JA7 882 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 HSD11B1LQ7Z5J1 315 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 KRTCAP2Q8N6L1 136 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 OR10Q1Q8NGQ4 319 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 OR10A6Q8NH74 314 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 RIN3Q8TB24 985 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 ITFG1Q8TB96 612 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SUSD6Q92537 303 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 MYOCQ99972 504 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 TRIM4Q9C037 500 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SH3BP4Q9P0V3 963 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 USP22Q9UPT9 525 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 TSC2P49815 1807 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 NYNRINQ9P2P1 1898 aaKnown RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 MYO1DO94832 1006 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 KCNH1O95259 989 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CLPTM1O96005 669 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 NTRK1P04629 796 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CHN2P52757 468 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CHRNB3Q05901 458 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 TCEAL5Q5H9L2 206 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SPANXN4Q5MJ08 99 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 BLOC1S3Q6QNY0 202 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 ZNF621Q6ZSS3 439 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 RNF168Q8IYW5 571 aaPredicted RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 LILRA2Q8N149 483 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CPXM2Q8N436 756 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 RNF175Q8N4F7 328 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 HMGCLL1Q8TB92 370 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 NMD3Q96D46 503 aaKnown RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 FAM120BQ96EK7 910 aaKnown RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 OSGEPL1Q9H4B0 414 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 SDR39U1Q9NRG7 319 aaPredicted RBP11.13□□□□□ -0.63
CLK4-206ENST00000520878 TMCO1Q9UM00 188 aa11.13□□□□□ -0.63
CLK4-206ENST00000520878 CATP04040 527 aaKnown RBP11.12□□□□□ -0.63
CLK4-206ENST00000520878 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
CLK4-206ENST00000520878 CSRP3P50461 194 aa11.12□□□□□ -0.63
CLK4-206ENST00000520878 TNK2Q07912 1038 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms