RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ENPEPQ07075 957 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CCDC173Q0VFZ6 552 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CDH18Q13634 790 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CBWD6Q4V339 395 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 DCAF6Q58WW2 860 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 SLC45A4Q5BKX6 768 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 MTX3Q5HYI7 312 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CBWD3Q5JTY5 395 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CBWD5Q5RIA9 395 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 MPP7Q5T2T1 576 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 PAPD7Q5XG87 772 aaKnown RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 NUGGCQ68CJ6 796 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 SLC9A4Q6AI14 798 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 ATL3Q6DD88 541 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 PMF1Q6P1K2 205 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 TMEM270Q6UE05 265 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 PRPF39Q86UA1 669 aaKnown RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 RAVER1Q8IY67 606 aaKnown RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 APCDD1Q8J025 514 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 AADATQ8N5Z0 425 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 ZNF557Q8N988 423 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 PNLDC1Q8NA58 520 aaKnown RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 HJURPQ8NCD3 748 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CLEC4CQ8WTT0 213 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 SLC35F5Q8WV83 523 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 MAML1Q92585 1016 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 FGF11Q92914 225 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 AZIN2Q96A70 460 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 PRICKLE1Q96MT3 831 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 SNX18Q96RF0 628 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 DDX50Q9BQ39 737 aaKnown RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 THAP7Q9BT49 309 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-216ENST00000520868 CNGB3Q9NQW8 809 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 NAALADL1Q9UQQ1 740 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 HPSEQ9Y251 543 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 TMEM131Q92545 1883 aa5.94□□□□□ -1.46
PABPC1-216ENST00000520868 KALRNO60229 2985 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 LOC102723971A0A1B0GUV8 181 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 WDR91A4D1P6 747 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 GOLGA6CA6NDK9 693 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 GOLGA6BA6NDN3 693 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 TMEM233B4DJY2 109 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 POC1B-GALNT4F8VUJ3 575 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 M0QYV0 167 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 CAPN9O14815 690 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 YKT6O15498 198 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 CCP110O43303 1012 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 RTN2O75298 545 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 LUC7L3O95232 432 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 IGLV3-27P01718 113 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 FYNP06241 537 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 SRPRAP08240 638 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 CHRM5P08912 532 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 GOLGA6DP0CG33 693 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 BRAFP15056 766 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 CKMT2P17540 419 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 NNMTP40261 264 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 RXRGP48443 463 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 STK19P49842 368 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 METAP1P53582 386 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ADPRHP54922 357 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 SUMO2P61956 95 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 YWHAEP62258 255 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ECT2LQ008S8 904 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 MLC1Q15049 377 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 EDRF1Q3B7T1 1238 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 POM121L1PQ3SYA9 428 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ACCSLQ4AC99 568 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ZCWPW2Q504Y3 356 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 MS4A13Q5J8X5 152 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 RAP1GAP2Q684P5 730 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 NAPEPLDQ6IQ20 393 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 MSANTD2Q6P1R3 559 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 KIRREL2Q6UWL6 708 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 LCLAT1Q6UWP7 414 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 KDM7AQ6ZMT4 941 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ZNF66Q6ZN08 573 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 KRBA2Q6ZNG9 492 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 LGI2Q8N0V4 545 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 SCML4Q8N228 414 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ZNF843Q8N446 348 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 GALNT4Q8N4A0 578 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 SIRT6Q8N6T7 355 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 KDM1BQ8NB78 822 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 DQX1Q8TE96 717 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 TMEM171Q8WVE6 324 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 IRGQQ8WZA9 623 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 NMD3Q96D46 503 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 NAF1Q96HR8 494 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 WDR26Q9H7D7 661 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 GOLGA6AQ9NYA3 693 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 XPO7Q9UIA9 1087 aaKnown RBP5.93□□□□□ -1.46
PABPC1-216ENST00000520868 KIAA1257Q9ULG3 409 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 FZD4Q9ULV1 537 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 CA5BQ9Y2D0 317 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 PTPRQQ9UMZ3 2332 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 SHROOM3Q8TF72 1996 aa5.93□□□□□ -1.46
PABPC1-216ENST00000520868 ZNF462Q96JM2 2506 aa5.92□□□□□ -1.46
PABPC1-216ENST00000520868 C10orf142B7Z368 130 aa5.92□□□□□ -1.46
PABPC1-216ENST00000520868 M0R3H8 397 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms