RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ZSWIM3Q96MP5 696 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 KLHL32Q96NJ5 620 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF599Q96NL3 588 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 BIRC8Q96P09 236 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 CATSPER2Q96P56 530 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 PLEKHG4BQ96PX9 1271 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 SEMA3CQ99985 751 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 ECSITQ9BQ95 431 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 MRPL57Q9BQC6 102 aaKnown RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 CLSTN3Q9BQT9 956 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 GPATCH1Q9BRR8 931 aaKnown RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 TMEM175Q9BSA9 504 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 C1QTNF3Q9BXJ4 246 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 SLC2A11Q9BYW1 496 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 NUF2Q9BZD4 464 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 FBXO44Q9H4M3 255 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 POMKQ9H5K3 350 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 FAM96AQ9H5X1 160 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 SPC25Q9HBM1 224 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 ZBTB26Q9HCK0 441 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF334Q9HCZ1 680 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 RIC8BQ9NVN3 520 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 GEMIN8Q9NWZ8 242 aaKnown RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 UXTQ9UBK9 157 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 CD300AQ9UGN4 299 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 CORO1CQ9ULV4 474 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 PCDHGB4Q9UN71 923 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 WASF3Q9UPY6 502 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 RUVBL2Q9Y230 463 aaKnown RBP4.48□□□□□ -1.69
PABPC1-212ENST00000519622 SSX2IPQ9Y2D8 614 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 LRCH1Q9Y2L9 728 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 ACOT9Q9Y305 439 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 PCDHGB5Q9Y5G0 923 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 PCDHGA7Q9Y5G6 932 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 PTGDR2Q9Y5Y4 395 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 ARL5AQ9Y689 179 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 BRCA2P51587 3418 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 NOTCH4Q99466 2003 aa4.48□□□□□ -1.69
PABPC1-212ENST00000519622 KIF26AQ9ULI4 1882 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 A0A0U1RQS6 177 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ARHGEF37A1IGU5 675 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF840PA6NDX5 716 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PRAMEF25A6NGN4 478 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 OTOL1A6NHN0 477 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF891A8MT65 544 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 NT5C1B-RDH14C9J2C7 533 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 NEMP1O14524 444 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 GPR39O43194 453 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FOXD2O60548 495 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 TLR5O60602 858 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RAMP2O60895 175 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FKBP6O75344 327 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RPP40O75818 363 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CDK14O94921 469 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ABLIM3O94929 683 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RTN3O95197 1032 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 NDST3O95803 873 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PENKP01210 267 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FGF1P05230 155 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 HMBSP08397 361 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PDHA1P08559 390 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 LTA4HP09960 611 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PIRTP0C851 137 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CCDC166P0CW27 439 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SLC2A3P11169 496 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 NEFHP12036 1026 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FAHP16930 419 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RPL17P18621 184 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 HLA-DPA1P20036 260 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 OGNP20774 298 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ADSLP30566 484 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 THBS2P35442 1172 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PPARGP37231 505 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SLC26A3P40879 764 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ATP4BP51164 291 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RENBPP51606 427 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 STC1P52823 247 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CLNS1AP54105 237 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SESN3P58005 492 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RPS24P62847 133 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CDKL1Q00532 357 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 GNA12Q03113 381 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SMAD4Q13485 552 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CUL3Q13618 768 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CSHL1Q14406 222 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 GALNT3Q14435 633 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PDCD2Q16342 344 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CDKN3Q16667 212 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 UGP2Q16851 508 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 XKR7Q5GH72 579 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FSCBQ5H9T9 825 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 C10orf120Q5SQS8 335 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PHF19Q5T6S3 580 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 GPR158Q5T848 1215 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 MARC1Q5VT66 337 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 KANK2Q63ZY3 851 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 LPCAT4Q643R3 524 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SEL1L3Q68CR1 1132 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 KLHDC10Q6PID8 442 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms