RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SLC2A14Q8TDB8 520 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 CREB3L4Q8TEY5 395 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TEKT4Q8WW24 435 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 GLMPQ8WWB7 406 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 FUBP1Q96AE4 644 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 CTHRC1Q96CG8 243 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 ELP4Q96EB1 424 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 RNFT2Q96EX2 444 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 PRR11Q96HE9 360 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 C9orf72Q96LT7 481 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TSPAN18Q96SJ8 248 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 CD180Q99467 661 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TMEM121Q9BTD3 319 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 SSBP3Q9BWW4 388 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 FRMD8P1Q9BZ68 369 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 MIS12Q9H081 205 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 SNX25Q9H3E2 840 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TLR8Q9NR97 1041 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TMEM30AQ9NV96 361 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 THAP1Q9NVV9 213 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 BEX4Q9NWD9 120 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 AURKAIP1Q9NWT8 199 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 MIOSQ9NXC5 875 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 MTMR10Q9NXD2 777 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 PPP1R14DQ9NXH3 145 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D14Q9P2M4 693 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 LGALS13Q9UHV8 139 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 VPS4AQ9UN37 437 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 ST3GAL5Q9UNP4 418 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 ZNF148Q9UQR1 794 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TCAF1Q9Y4C2 921 aa4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 COPG1Q9Y678 874 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-212ENST00000518919 TRIP11Q15643 1979 aa4.84□□□□□ -1.64
CTNNA1-212ENST00000518919 C5orf60A6NFR6 353 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 FOXO6A8MYZ6 492 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ZNF487B1APH4 448 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SGK1O00141 431 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CLDN5O00501 218 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CYB561D2O14569 222 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RASGRF2O14827 1237 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 XPO1O14980 1071 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MCF2LO15068 1137 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MDM4O15151 490 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RGS16O15492 202 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PROM1O43490 865 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 TRAPPC3O43617 180 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PRPSAP2O60256 369 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 LPXNO60711 386 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ATP2C2O75185 946 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RNF8O76064 485 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 METTL18O95568 372 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MLYCDO95822 493 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 IFNB1P01574 187 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 GHRP10912 638 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 LAG3P18627 525 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 DRD4P21917 467 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ACAT1P24752 427 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PSMA4P25789 261 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CD52P31358 61 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SDC4P31431 198 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RPL22P35268 128 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 HOXD12P35452 270 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 GNL1P36915 607 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MAGEA4P43358 317 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ACADSBP45954 432 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CTCFP49711 727 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CACNA2D1P54289 1103 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CDH15P55291 814 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 INHBEP58166 350 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 EIF3EP60228 445 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PITX1P78337 314 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ROR1Q01973 937 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ADIGQ0VDE8 80 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 DCTN2Q13561 401 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 TP53BP2Q13625 1128 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KRT81Q14533 505 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KCNJ11Q14654 390 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 LPIN1Q14693 890 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ICAM4Q14773 271 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MORF4L2Q15014 288 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 EFTUD2Q15029 972 aaKnown RBP eCLIP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 DPYSL2Q16555 572 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KYNUQ16719 465 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MDH1BQ5I0G3 518 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM182AQ5T1J6 154 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 VWA1Q6PCB0 445 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CD300LGQ6UXG3 332 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 BHLHA9Q7RTU4 235 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 BNIPLQ7Z465 357 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MRPL10Q7Z7H8 261 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PIGZQ86VD9 579 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 NLRP14Q86W24 1093 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 VSIG1Q86XK7 387 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ZDHHC17Q8IUH5 632 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CCDC13Q8IYE1 715 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ARFGAP2Q8N6H7 521 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CCDC185Q8N715 623 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 NAT8LQ8N9F0 302 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KCTD6Q8NC69 237 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms