RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PPP5CP53041 499 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 GBX1Q14549 363 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 KIAA0040Q15053 153 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 COLEC12Q5KU26 742 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 GCNT7Q6ZNI0 430 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 EFL1Q7Z2Z2 1120 aaKnown RBP12.16□□□□□ -0.46
PCM1-203ENST00000517545 DPP9Q86TI2 863 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 AKAP14Q86UN6 197 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 ATP6V0D2Q8N8Y2 350 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 FBLIM1Q8WUP2 373 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 EEF1AKMT1Q8WVE0 214 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 GTF2H4Q92759 462 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 PYCR2Q96C36 320 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 SLC6A13Q9NSD5 602 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 ELOVL7A1L3X0 281 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 OR1I1O60431 355 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 PCSK1P29120 753 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 BRCC3P46736 316 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 PTPRNQ16849 979 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 LRIT3Q3SXY7 679 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 FAM174BQ3ZCQ3 159 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 MSANTD2Q6P1R3 559 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 LINC00299Q6ZSB3 139 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ADHFE1Q8IWW8 467 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 UMODL1-AS1Q8N2C9 162 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 OR10T2Q8NGX3 314 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 SLC13A3Q8WWT9 602 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 UBE2FQ969M7 185 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ZNF566Q969W8 418 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 TADA1Q96BN2 335 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 C1QTNF3Q9BXJ4 246 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 HOXD1Q9GZZ0 328 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ITM2CQ9NQX7 267 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 A0A1W2PQH9 124 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 M0QX08 132 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 KLK8O60259 260 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 DLGAP3O95886 979 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 LCKP06239 509 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 HOXB8P17481 243 aaPredicted RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 IGFBP5P24593 272 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 EPHA2P29317 976 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 PIK3CGP48736 1102 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 SYT6Q5T7P8 510 aaPredicted RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 STEAP3Q658P3 488 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 CYP2U1Q7Z449 544 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 POC5Q8NA72 575 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 FAM83FQ8NEG4 500 aaPredicted RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 NETO1Q8TDF5 533 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 REXO5Q96IC2 774 aaKnown RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 DUSP21Q9H596 190 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ZBTB20Q9HC78 741 aaPredicted RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 PKP3Q9Y446 797 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 SNPHO15079 494 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 UPK1BO75841 260 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 SERPINA1P01009 418 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 OGNP20774 298 aaKnown RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 HTR7P34969 479 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
PCM1-203ENST00000517545 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCM1-203ENST00000517545 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 GPSM1Q86YR5 675 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 PLD3Q8IV08 490 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 MCFD2Q8NI22 146 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 GIPC2Q8TF65 315 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCM1-203ENST00000517545 ZMYM5Q9UJ78 669 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 SPO11Q9Y5K1 396 aa12.15□□□□□ -0.46
PCM1-203ENST00000517545 GRXCR2A6NFK2 248 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 HOXD8P13378 290 aaPredicted RBP12.14□□□□□ -0.47
PCM1-203ENST00000517545 ACVRL1P37023 503 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
PCM1-203ENST00000517545 SCNN1GP51170 649 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 RPL38P63173 70 aaKnown RBP12.14□□□□□ -0.47
PCM1-203ENST00000517545 ADAM17P78536 824 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 SPANXN4Q5MJ08 99 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 SDHAF4Q5VUM1 108 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 FAM171BQ6P995 826 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 CEP68Q76N32 757 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 KRTCAP2Q8N6L1 136 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 BRSK1Q8TDC3 778 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 LINGO1Q96FE5 620 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 ZNF382Q96SR6 550 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 BCL7BQ9BQE9 202 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 SARS2Q9NP81 518 aaKnown RBP12.14□□□□□ -0.47
PCM1-203ENST00000517545 ACOT13Q9NPJ3 140 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 DCAF13Q9NV06 445 aaKnown RBP12.14□□□□□ -0.47
PCM1-203ENST00000517545 IFT52Q9Y366 437 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 ORC6Q9Y5N6 252 aa12.14□□□□□ -0.47
PCM1-203ENST00000517545 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
PCM1-203ENST00000517545 NUAK1O60285 661 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms