RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 IQCB1Q15051 598 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 SLC18A3Q16572 532 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 DCAF10Q5QP82 559 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 MLIPQ5VWP3 458 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 GPR135Q8IZ08 494 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 SLC34A3Q8N130 599 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 ZADH2Q8N4Q0 377 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 LILRA3Q8N6C8 439 aaPredicted RBP15.27■□□□□ 0.04
LMNA-223ENST00000515459 OXNAD1Q96HP4 312 aaPredicted RBP15.27■□□□□ 0.04
LMNA-223ENST00000515459 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 FCRL5Q96RD9 977 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 FERD3LQ96RJ6 166 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 BARD1Q99728 777 aaKnown RBP15.27■□□□□ 0.04
LMNA-223ENST00000515459 FSD1LQ9BXM9 530 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 ZNF552Q9H707 407 aaPredicted RBP15.27■□□□□ 0.04
LMNA-223ENST00000515459 ASB8Q9H765 288 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
LMNA-223ENST00000515459 FER1L5A0AVI2 2057 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 TEP1Q99973 2627 aaKnown RBP15.26■□□□□ 0.03
LMNA-223ENST00000515459 BTN3A1O00481 513 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 SRP72O76094 671 aaKnown RBP15.26■□□□□ 0.03
LMNA-223ENST00000515459 GYPCP04921 128 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 CD63P08962 238 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 TMEM253P0C7T8 217 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 RALBP11234 206 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 FOLR3P41439 243 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 ARHGAP25P42331 645 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 GLRBP48167 497 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 FANCCQ00597 558 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 CRB2Q5IJ48 1285 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 SPOCD1Q6ZMY3 1216 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 Q6ZS92 163 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 CDHR3Q6ZTQ4 885 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 PID1Q7Z2X4 250 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 DAAM2Q86T65 1068 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 SLC35G2Q8TBE7 412 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 HM13Q8TCT9 377 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 INPP5DQ92835 1189 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 DCUN1D1Q96GG9 259 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 RBM41Q96IZ5 413 aaKnown RBP15.26■□□□□ 0.03
LMNA-223ENST00000515459 VAT1Q99536 393 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 KLHL25Q9H0H3 589 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 AGPAT4Q9NRZ5 378 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 DDX56Q9NY93 547 aaKnown RBP15.26■□□□□ 0.03
LMNA-223ENST00000515459 GPN3Q9UHW5 284 aaPredicted RBP15.26■□□□□ 0.03
LMNA-223ENST00000515459 PTRH2Q9Y3E5 179 aaKnown RBP15.26■□□□□ 0.03
LMNA-223ENST00000515459 ARL5AQ9Y689 179 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 ABCA12Q86UK0 2595 aa15.26■□□□□ 0.03
LMNA-223ENST00000515459 NUP210LQ5VU65 1888 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 LRBAP50851 2863 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 CCDC66A2RUB6 948 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 C2orf81A6NN90 581 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 C2orf74A8MZ97 194 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 SGTAO43765 313 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 CBSLP0DN79 551 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 PVRP15151 417 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 CBSP35520 551 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 PRLHRP49683 370 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 UBASH3AP57075 661 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 MFSD7Q6UXD7 560 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 SRRM1Q8IYB3 904 aaKnown RBP15.25■□□□□ 0.03
LMNA-223ENST00000515459 ZNF567Q8N184 647 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 ST6GALNAC3Q8NDV1 305 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 OR52E1Q8NGJ3 308 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 N4BP2L2Q92802 583 aaPredicted RBP15.25■□□□□ 0.03
LMNA-223ENST00000515459 TFB2MQ9H5Q4 396 aaKnown RBP15.25■□□□□ 0.03
LMNA-223ENST00000515459 P4HTMQ9NXG6 502 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 NTNG1Q9Y2I2 539 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 PCDHGA10Q9Y5H3 936 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 AP1M2Q9Y6Q5 423 aa15.25■□□□□ 0.03
LMNA-223ENST00000515459 PCM1Q15154 2024 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 CROCCQ5TZA2 2017 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 C17orf113A0A1B0GUU1 675 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 IFRD1O00458 451 aaPredicted RBP15.24■□□□□ 0.03
LMNA-223ENST00000515459 OR2B3O76000 313 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 TNNT1P13805 278 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 PECAM1P16284 738 aaPredicted RBP15.24■□□□□ 0.03
LMNA-223ENST00000515459 ELAVL4P26378 380 aaKnown RBP15.24■□□□□ 0.03
LMNA-223ENST00000515459 HNRNPH3P31942 346 aaKnown RBP15.24■□□□□ 0.03
LMNA-223ENST00000515459 SOX8P57073 446 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 TPM4P67936 248 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 TFDP2Q14188 446 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 LLGL1Q15334 1064 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 TAF1AQ15573 450 aaPredicted RBP15.24■□□□□ 0.03
LMNA-223ENST00000515459 RHBDD2Q6NTF9 364 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 SARM1Q6SZW1 724 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 CUZD1Q86UP6 607 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
LMNA-223ENST00000515459 HOOK3Q86VS8 718 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 AMIGO1Q86WK6 493 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 OR4K2Q8NGD2 314 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 OR2Y1Q8NGV0 311 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 PTERQ96BW5 349 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 NRTNQ99748 197 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 NDOR1Q9UHB4 597 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 FKBPLQ9UIM3 349 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 CRLS1Q9UJA2 301 aa15.24■□□□□ 0.03
LMNA-223ENST00000515459 MDC1Q14676 2089 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms