RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KDM1AO60341 852 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 AVILO75366 819 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 NDUFS3O75489 264 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 RASSF9O75901 435 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 USP1O94782 785 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 VAPBO95292 243 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 NELFEP18615 380 aaKnown RBP12.44□□□□□ -0.42
CLCN3-210ENST00000515420 ACADLP28330 430 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 PREPP48147 710 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 LEPRP48357 1165 aaKnown RBP12.44□□□□□ -0.42
CLCN3-210ENST00000515420 ARCN1P48444 511 aaKnown RBP12.44□□□□□ -0.42
CLCN3-210ENST00000515420 IL11RAQ14626 422 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 CACHD1Q5VU97 1274 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 CASC4Q6P4E1 433 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 TBC1D21Q8IYX1 336 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 SLC22A15Q8IZD6 547 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 LCN9Q8WX39 176 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 SLC41A2Q96JW4 573 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 FERD3LQ96RJ6 166 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 CCNL2Q96S94 520 aaPredicted RBP12.44□□□□□ -0.42
CLCN3-210ENST00000515420 SRMSQ9H3Y6 488 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 HRASLS2Q9NWW9 162 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 ASIC3Q9UHC3 531 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 POLG2Q9UHN1 485 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLCN3-210ENST00000515420 ZFYVE26Q68DK2 2539 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 TEX51A0A1B0GUA7 166 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 AGRPO00253 132 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 POLR1CO15160 346 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 GPC4O75487 556 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 SLCO2B1O94956 709 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 APOA4P06727 396 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 AOAHP28039 575 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 CCR7P32248 378 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 PTGIRP43119 386 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 PRKAA1Q13131 559 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 DHX34Q14147 1143 aaKnown RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 TMED2Q15363 201 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ANKRD20A4Q4UJ75 823 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 DNAJC21Q5F1R6 531 aaKnown RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ANKS6Q68DC2 871 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ARMC6Q6NXE6 501 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 GPR155Q7Z3F1 870 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ZFAND4Q86XD8 727 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 OR52E1Q8NGJ3 308 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 OR5K2Q8NHB8 316 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 CAPZA3Q96KX2 299 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 SIGLEC10Q96LC7 697 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 FCRL3Q96P31 734 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 SPRY4Q9C004 299 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 TRIT1Q9H3H1 467 aaKnown RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 INTS10Q9NVR2 710 aaKnown RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 POMT2Q9UKY4 750 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ASF1AQ9Y294 204 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 TMEM184BQ9Y519 407 aaPredicted RBP12.43□□□□□ -0.42
CLCN3-210ENST00000515420 RPS6KL1Q9Y6S9 549 aa12.43□□□□□ -0.42
CLCN3-210ENST00000515420 ZCWPW2A0A1B0GU75 182 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 UBA6A0AVT1 1052 aaPredicted RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 OR6C74A6NCV1 312 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 GOLGA8MH3BSY2 632 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 K7ENP7 123 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 NDC80O14777 642 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 KIF1CO43896 1103 aaKnown RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 TTC4O95801 387 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 ESR1P03372 595 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 RPN2P04844 631 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 IVDP26440 423 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 TERF1P54274 439 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 DR1Q01658 176 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 VAC14Q08AM6 782 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 MAP7Q14244 749 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 PTRHD1Q6GMV3 140 aaKnown RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 NEPROQ6NW34 567 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 INO80CQ6PI98 192 aaPredicted RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 CES3Q6UWW8 571 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 UNC5DQ6UXZ4 953 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 FAM92BQ6ZTR7 304 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 LDB1Q86U70 411 aaPredicted RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 AMIGO1Q86WK6 493 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 CILP2Q8IUL8 1156 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 JPH3Q8WXH2 748 aaPredicted RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 LPGAT1Q92604 370 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 PMEPA1Q969W9 287 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
CLCN3-210ENST00000515420 BIRC8Q96P09 236 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 FCRL4Q96PJ5 515 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 MAP3K3Q99759 626 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 NAT9Q9BTE0 207 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 C1GALT1Q9NS00 363 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 PILRAQ9UKJ1 303 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 CDYLQ9Y232 598 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 BTRCQ9Y297 605 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 MRFAP1Q9Y605 127 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms