RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 SP140Q13342 867 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF460Q14592 562 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 TSNAXIP1Q2TAA8 658 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 AGBL2Q5U5Z8 902 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 IYDQ6PHW0 289 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 TAF8Q7Z7C8 310 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 TBC1D1Q86TI0 1168 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 VRK3Q8IV63 474 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 CPNE9Q8IYJ1 553 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 CENPLQ8N0S6 344 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC25A45Q8N413 288 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 LILRA3Q8N6C8 439 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 LMX1AQ8TE12 382 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 EEF1AKMT1Q8WVE0 214 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ANKRD49Q8WVL7 239 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ZFPM2Q8WW38 1151 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ASB11Q8WXH4 323 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 TLCD1Q96CP7 247 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 RMDN2Q96LZ7 410 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 RTKNQ9BST9 563 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 NMRAL1Q9HBL8 299 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SEMA4GQ9NTN9 838 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 NLGN3Q9NZ94 848 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 TAAR2Q9P1P5 351 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 DCDC2Q9UHG0 476 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 DNAJC16Q9Y2G8 782 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 HEBP2Q9Y5Z4 205 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SPTBN2O15020 2390 aa11.71□□□□□ -0.54
PDLIM5-220ENST00000514830 PSIP1O75475 530 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 C8GP07360 202 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 ANXA6P08133 673 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 CELA2BP08218 269 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 CCDC166P0CW27 439 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 CD1DP15813 335 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 SAT1P21673 171 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 NDUFS1P28331 727 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 PDHA2P29803 388 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 HALP42357 657 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 PREPP48147 710 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 ACAP2Q15057 778 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 FAM83EQ2M2I3 478 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 PPM1JQ5JR12 505 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC30A9Q6PML9 568 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 RAPH1Q70E73 1250 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 RBM12BQ8IXT5 1001 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 MYO1HQ8N1T3 1032 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 SFRP1Q8N474 314 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 MINDY1Q8N5J2 469 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 FAM181AQ8N9Y4 354 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 OR4C6Q8NH72 309 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 RHEBL1Q8TAI7 183 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 KIAA1191Q96A73 305 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 FAM136AQ96C01 138 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 LINGO1Q96FE5 620 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 GPR78Q96P69 363 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 WWP1Q9H0M0 922 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 OSGEPL1Q9H4B0 414 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 TFB2MQ9H5Q4 396 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 MVB12BQ9H7P6 319 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 RDH14Q9HBH5 336 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 IGSF5Q9NSI5 407 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 UCKL1Q9NWZ5 548 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 WDR37Q9Y2I8 494 aa11.7□□□□□ -0.54
PDLIM5-220ENST00000514830 ANKRD12Q6UB98 2062 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 IFRD1O00458 451 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 GLRA3O75311 464 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 EML2O95834 649 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 RPN2P04844 631 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 ENO2P09104 434 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 ALPPL2P10696 532 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 PYGBP11216 843 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 MTHFD1P11586 935 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 KRT4P19013 534 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 CRHR1P34998 444 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 FASLGP48023 281 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 CCT5P48643 541 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 KPNA2P52292 529 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 PGGT1BP53609 377 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC18A1P54219 525 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 SPEM2Q0P670 501 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 DLG1Q12959 904 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 BNIP3Q12983 259 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 C1orf61Q13536 156 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 RPE65Q16518 533 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 CDKL4Q5MAI5 379 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 PRAMEF14Q5SWL7 426 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 TCEAL6Q6IPX3 200 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 ZCCHC8Q6NZY4 707 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 SBSNQ6UWP8 590 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 NAPRTQ6XQN6 538 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 PIWIL4Q7Z3Z4 852 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 ADAMTSL2Q86TH1 951 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 EXOC3L1Q86VI1 746 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 TBC1D21Q8IYX1 336 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 NAGSQ8N159 534 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 337 ms