RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 C19orf43Q9BQ61 176 aa11.86□□□□□ -0.51
SNHG4-208ENST00000514110 LUC7LQ9NQ29 371 aaKnown RBP11.86□□□□□ -0.51
SNHG4-208ENST00000514110 C1GALT1Q9NS00 363 aa11.86□□□□□ -0.51
SNHG4-208ENST00000514110 ZDHHC3Q9NYG2 299 aa11.86□□□□□ -0.51
SNHG4-208ENST00000514110 REXO2Q9Y3B8 237 aaKnown RBP11.86□□□□□ -0.51
SNHG4-208ENST00000514110 EPN1Q9Y6I3 576 aaPredicted RBP11.86□□□□□ -0.51
SNHG4-208ENST00000514110 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 GSAPA4D1B5 854 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 TMEM150CB9EJG8 249 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 MEN1O00255 615 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 MATN2O00339 956 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 KLK3P07288 261 aaPredicted RBP11.85□□□□□ -0.51
SNHG4-208ENST00000514110 CAPN1P07384 714 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 PVRP15151 417 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 ST6GAL1P15907 406 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 TPH1P17752 444 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 PRDX3P30048 256 aaKnown RBP11.85□□□□□ -0.51
SNHG4-208ENST00000514110 RORAP35398 523 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 PTGIRP43119 386 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 PREPP48147 710 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 LMAN1P49257 510 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 CCL11P51671 97 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 NAP1L1P55209 391 aaKnown RBP11.85□□□□□ -0.51
SNHG4-208ENST00000514110 RWDD2BP57060 319 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 GSDMDP57764 484 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 GPR33Q49SQ1 333 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 NADK2Q4G0N4 442 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 ZRANB3Q5FWF4 1079 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 KCTD11Q693B1 232 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 SERPINA9Q86WD7 417 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 ENDOVQ8N8Q3 282 aaKnown RBP11.85□□□□□ -0.51
SNHG4-208ENST00000514110 CPT1BQ92523 772 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 LRFN5Q96NI6 719 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 SLC25A23Q9BV35 468 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 LACRTQ9GZZ8 138 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 KLHL25Q9H0H3 589 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 ING2Q9H160 280 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 TFB2MQ9H5Q4 396 aaKnown RBP11.85□□□□□ -0.51
SNHG4-208ENST00000514110 XKR8Q9H6D3 395 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 FANCEQ9HB96 536 aa11.85□□□□□ -0.51
SNHG4-208ENST00000514110 NLE1Q9NVX2 485 aaPredicted RBP11.85□□□□□ -0.51
SNHG4-208ENST00000514110 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 BTNL10A8MVZ5 291 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 H7C0S8 307 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 IFRD1O00458 451 aaPredicted RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 TJP3O95049 919 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 METTL18O95568 372 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 RAB40ALP0C0E4 278 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 UQCRFS1P47985 274 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 CD151P48509 253 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PGDP52209 483 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PRKG2Q13237 762 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 DBN1Q16643 649 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 FAM198BQ6UWH4 519 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 RAD9BQ6WBX8 426 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 ATCAYQ86WG3 371 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 AMIGO1Q86WK6 493 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PIANPQ8IYJ0 282 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 SYTL1Q8IYJ3 562 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 ADGRF3Q8IZF5 1079 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 FAM26EQ8N5C1 309 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 LRRC57Q8N9N7 239 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 FAM71DQ8N9W8 422 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 CLIP3Q96DZ5 547 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 CDKN2AIPNLQ96HQ2 116 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 CALR3Q96L12 384 aaKnown RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PPP1R2P1Q96PQ5 205 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 TRAPPC9Q96Q05 1148 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PANX2Q96RD6 677 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 HGH1Q9BTY7 390 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 NLNQ9BYT8 704 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 MVB12BQ9H7P6 319 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 MLXIPLQ9NP71 852 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 ACSS2Q9NR19 701 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PCMTD2Q9NV79 361 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PIH1D1Q9NWS0 290 aaKnown RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 FEZ2Q9UHY8 353 aaPredicted RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 TCFL5Q9UL49 500 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PCDHGA9Q9Y5G4 932 aaKnown RBP11.84□□□□□ -0.51
SNHG4-208ENST00000514110 PCSK5Q92824 1860 aa11.84□□□□□ -0.51
SNHG4-208ENST00000514110 NBASA2RRP1 2371 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 TTLL8A6PVC2 850 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 GP1BBP13224 206 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 CYP2A7P20853 494 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 CETN2P41208 172 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 ITGA1P56199 1179 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 CACNG1Q06432 222 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 RPA4Q13156 261 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 POU6F1Q14863 301 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 PARP6Q2NL67 630 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 PTCHD3Q3KNS1 767 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 PAPD7Q5XG87 772 aaKnown RBP11.83□□□□□ -0.52
SNHG4-208ENST00000514110 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 CDHR3Q6ZTQ4 885 aa11.83□□□□□ -0.52
SNHG4-208ENST00000514110 TMTC1Q8IUR5 882 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms