RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 POLR1BQ9H9Y6 1135 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 SAYSD1Q9NPB0 183 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 THSD1Q9NS62 852 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 IARS2Q9NSE4 1012 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 TAS2R13Q9NYV9 303 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 PSMD13Q9UNM6 376 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CHMP2BQ9UQN3 213 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 PCDHB11Q9Y5F2 797 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 IKBKGQ9Y6K9 419 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 U3KQA8 63 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 LAMA1P25391 3075 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 DSPP15924 2871 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ZCWPW2A0A1B0GU75 182 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 CCDC189A1A4V9 331 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 OR52A4PA6NMU1 304 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 EIF3FO00303 357 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 RRP8O43159 456 aaKnown RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 OR1I1O60431 355 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 RASSF9O75901 435 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 CATP04040 527 aaKnown RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 HSD17B2P37059 387 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 SLC19A1P41440 591 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 LEPRP48357 1165 aaKnown RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 LSSP48449 732 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 LIMK2P53671 638 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 MGAT5Q09328 741 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 NAB1Q13506 487 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 GPR18Q14330 331 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 SLMAPQ14BN4 828 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 NAA25Q14CX7 972 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 BRD3Q15059 726 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 TMTC4Q5T4D3 741 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 USP53Q70EK8 1073 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 TAOK1Q7L7X3 1001 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 RAB11FIP2Q7L804 512 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 GALNT7Q86SF2 657 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 SLC26A11Q86WA9 606 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 KMT5CQ86Y97 462 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 FBXO36Q8NEA4 188 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 PATE1Q8WXA2 126 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 IFT81Q8WYA0 676 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 UBXN4Q92575 508 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 LPGAT1Q92604 370 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 KCNJ9Q92806 393 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 INPP5DQ92835 1189 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 ART4Q93070 314 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 ZNF578Q96N58 590 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 ZPBPQ9BS86 351 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 TRIM54Q9BYV2 358 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 ASPSCR1Q9BZE9 553 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 B3GNT4Q9C0J1 378 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 RAB33BQ9H082 229 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 LATS2Q9NRM7 1088 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 UTP6Q9NYH9 597 aaKnown RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 MARCH4Q9P2E8 410 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 LNPEPQ9UIQ6 1025 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 TRMT6Q9UJA5 497 aaKnown RBP7.29□□□□□ -1.24
NR1I3-231ENST00000512340 KLK13Q9UKR3 277 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 SLC39A10Q9ULF5 831 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 CRYL1Q9Y2S2 319 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 ENTPD2Q9Y5L3 495 aa7.29□□□□□ -1.24
NR1I3-231ENST00000512340 TRABD2BA6NFA1 517 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 PRR19A6NJB7 356 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 SRRM3A6NNA2 597 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-231ENST00000512340 C2orf74A8MZ97 194 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 C1QTNF9BB2RNN3 333 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 GOLGA8KD6RF30 607 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 E7ESA3 106 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 GOLGA8TH3BQL2 631 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 PLD2O14939 933 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 B4GAT1O43505 415 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 SLCO2B1O94956 709 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 S1PR4O95977 384 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 HIST1H2AGP0C0S8 130 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-231ENST00000512340 C1QTNF9P0C862 333 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 ERVK-10P10266 1014 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 BRAFP15056 766 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 ITGB6P18564 788 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 HIST1H2ADP20671 130 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 AOAHP28039 575 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CD1CP29017 333 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CCR7P32248 378 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 SLC1A2P43004 574 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CAPZBP47756 277 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 PREPP48147 710 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CARSP49589 748 aaKnown RBP7.28□□□□□ -1.24
NR1I3-231ENST00000512340 RAB15P59190 212 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 ERVPABLB-1P60509 514 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CBLBQ13191 982 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CTBP1Q13363 440 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 PDAP1Q13442 181 aaKnown RBP7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CLCA4Q14CN2 919 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 RTP5Q14D33 572 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 STEAP4Q687X5 459 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 CAPRIN2Q6IMN6 1127 aaKnown RBP7.28□□□□□ -1.24
NR1I3-231ENST00000512340 FAM45BPQ6NSW5 357 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 IRGCQ6NXR0 463 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 FOXR1Q6PIV2 292 aa7.28□□□□□ -1.24
NR1I3-231ENST00000512340 DNAJC14Q6Y2X3 702 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-231ENST00000512340 UNC5AQ6ZN44 842 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms