RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 FOLH1Q04609 750 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RASGEF1BQ0VAM2 473 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FUT5Q11128 374 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDC20Q12834 499 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BNIP3Q12983 259 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPS1Q13098 491 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RFTN1Q14699 578 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 WSCD2Q2TBF2 565 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BBS9Q3SYG4 887 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 AARS2Q5JTZ9 985 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LDLRAP1Q5SW96 308 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CXorf57Q6NSI4 855 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BHLHB9Q6PI77 547 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNF19BQ6ZMZ0 732 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 DCDC5Q6ZRR9 648 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MFSD6Q6ZSS7 791 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADCK2Q7Z695 626 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TFAP2DQ7Z6R9 452 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RALGPS2Q86X27 583 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC103Q8IW40 242 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCOLN2Q8IZK6 566 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYCE1Q8N0S2 351 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 STKLD1Q8NE28 680 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNV2Q8TDN2 545 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATG4AQ8WYN0 398 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTC9Q92623 222 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HDAC2Q92769 488 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FOXJ1Q92949 421 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GLMNQ92990 594 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GAL3ST3Q96A11 431 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCYL1Q96KG9 808 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA17Q96L03 361 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATOH8Q96SQ7 321 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC30A3Q99726 388 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CORO1BQ9BR76 489 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM79Q9BSE2 394 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MED10Q9BTT4 135 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HERC2P3Q9BVR0 1158 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHID1Q9BWS9 393 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDADC1Q9BWV3 514 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACE2Q9BYF1 805 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FANCEQ9HB96 536 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 VAT1LQ9HCJ6 419 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPAMQ9HCL2 828 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF334Q9HCZ1 680 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZFP64Q9NPA5 681 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM207AQ9NSI2 230 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SETD4Q9NVD3 440 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 XPR1Q9UBH6 696 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EIF3KQ9UBQ5 218 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINB13Q9UIV8 391 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZFP69BQ9UJL9 534 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCND3Q9UK17 655 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNPEPQ9ULA0 475 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NDRG4Q9ULP0 352 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TNFSF13BQ9Y275 285 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP11BQ9Y2G3 1177 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRPS17Q9Y2R5 130 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SAR1BQ9Y6B6 198 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZHX2Q9Y6X8 837 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMIM31A0A1B0GVY4 71 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LINC01553A4QN01 128 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5H15A6NDH6 313 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5H14A6NHG9 310 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5H1A6NKK0 313 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LAD1O00515 517 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 INPP4BO15327 924 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZC3H11AO75152 810 aaKnown RBP eCLIP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BCAS1O75363 584 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ULK1O75385 1050 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP5BP06576 529 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERCC1P07992 297 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CBSLP0DN79 551 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EPB42P16452 691 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CTPS1P17812 591 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC6A2P23975 617 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CBSP35520 551 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACLYP53396 1101 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB25P57735 213 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL2P60568 153 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZP1P60852 638 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GNG11P61952 73 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPS6P62753 249 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC35A2P78381 396 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SP4Q02446 784 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GUCA2AQ02747 115 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFRD2Q12894 506 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CSTF3Q12996 717 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCGB2A2Q13296 93 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYLC2Q14093 348 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MXD4Q14582 209 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TCEA2Q15560 299 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB30Q15771 203 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NDUFA9Q16795 377 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IMPG1Q17R60 797 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMU1Q2TAY7 513 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC38Q5VT99 294 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARHGAP17Q68EM7 881 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LAYNQ6UX15 382 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C16orf89Q6UX73 402 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms