RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SH3BP2P78314 561 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 PRKG2Q13237 762 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 PLCL1Q15111 1095 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 AARS2Q5JTZ9 985 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 GPR155Q7Z3F1 870 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 SDCCAG8Q86SQ7 713 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 NKD1Q969G9 470 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 TEFMQ96QE5 360 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 TCF12Q99081 682 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 MAP3K3Q99759 626 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 TRIM56Q9BRZ2 755 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 ZPBPQ9BS86 351 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 PILRAQ9UKJ1 303 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 PCDHB11Q9Y5F2 797 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 IGSF10Q6WRI0 2623 aa15.7■□□□□ 0.1
PDLIM5-216ENST00000511767 CTAGE9A4FU28 777 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 F8W8V4 182 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 GOLGA8TH3BQL2 631 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 BTN3A3O00478 584 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 NDUFS3O75489 264 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 RASSF9O75901 435 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 SLCO2B1O94956 709 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 POLR2CP19387 275 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 RPS3P23396 243 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 CXADRP78310 365 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 VAC14Q08AM6 782 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 SRSF6Q13247 344 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 RNASEH2BQ5TBB1 312 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 ARHGAP40Q5TG30 622 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 KIAA0930Q6ICG6 404 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 NEPROQ6NW34 567 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 CEACAM20Q6UY09 585 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 VRK3Q8IV63 474 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 KRT222Q8N1A0 295 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 LKAAEAR1Q8TD35 194 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 ASZ1Q8WWH4 475 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 LCN9Q8WX39 176 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 UBXN4Q92575 508 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 BIRC8Q96P09 236 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 SRMSQ9H3Y6 488 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 SDK2Q58EX2 2172 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 CACNA1GO43497 2377 aa15.69■□□□□ 0.1
PDLIM5-216ENST00000511767 ZCWPW2A0A1B0GU75 182 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 STMND1H3BQB6 276 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 K7ENP7 123 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 S1PR4O95977 384 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 TMPRSS3P57727 454 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 HSPA14Q0VDF9 509 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 PTK6Q13882 451 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 IL11RAQ14626 422 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 MRNIPQ6NTE8 343 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 CASC4Q6P4E1 433 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 INO80CQ6PI98 192 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 CCDC81Q6ZN84 652 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 CENPUQ71F23 418 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 TIPARPQ7Z3E1 657 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 OOSP2Q86WS3 158 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 LRRC6Q86X45 466 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 SLC22A15Q8IZD6 547 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 OR52E1Q8NGJ3 308 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 PPM1MQ96MI6 270 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 CD180Q99467 661 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 RNF14Q9UBS8 474 aa15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 TMEM184BQ9Y519 407 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-216ENST00000511767 DNALI1O14645 258 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 FGF5P12034 268 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 FOLR1P15328 257 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 PRDX3P30048 256 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 FMO4P31512 558 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 KPNA2P52292 529 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 CSE1LP55060 971 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 FOXM1Q08050 763 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 ABRQ12979 859 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 DHX34Q14147 1143 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 SOWAHCQ53LP3 525 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 DNTTIP2Q5QJE6 756 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 PTRHD1Q6GMV3 140 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 ARMC6Q6NXE6 501 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 FBXO38Q6PIJ6 1188 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 PCGF5Q86SE9 256 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 AMIGO1Q86WK6 493 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 TBC1D21Q8IYX1 336 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 ADGRF3Q8IZF5 1079 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 OR5AR1Q8NGP9 310 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 LPGAT1Q92604 370 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 OR6C1Q96RD1 312 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 TWSG1Q9GZX9 223 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 XKR8Q9H6D3 395 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 LATS2Q9NRM7 1088 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 POLG2Q9UHN1 485 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 ASF1AQ9Y294 204 aa15.67■□□□□ 0.1
PDLIM5-216ENST00000511767 RPS6KL1Q9Y6S9 549 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms