RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 POLR2CP19387 275 aaPredicted RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 WT1P19544 449 aaPredicted RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 AOAHP28039 575 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 KPNA2P52292 529 aaKnown RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 ERVPABLB-1P60509 514 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 SARNPP82979 210 aaKnown RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 TLE3Q04726 772 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 HSPA14Q0VDF9 509 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 ABRQ12979 859 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CLN3Q13286 438 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 EIF3IQ13347 325 aaKnown RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 FASTKD3Q14CZ7 662 aaKnown RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 PLCL1Q15111 1095 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CLPPQ16740 277 aaPredicted RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 BBS9Q3SYG4 887 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CCSMST1Q4G0I0 132 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 LYPLAL1Q5VWZ2 237 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 NEPROQ6NW34 567 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CILP2Q8IUL8 1156 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 LSMEM2Q8N112 164 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
SNF8-206ENST00000509989 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNF8-206ENST00000509989 STAMBPL1Q96FJ0 436 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 KLHL25Q9H0H3 589 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 DPH5Q9H2P9 285 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 CPNE5Q9HCH3 593 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 THSD1Q9NS62 852 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 ANAPC5Q9UJX4 755 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 ICKQ9UPZ9 632 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 MED16Q9Y2X0 877 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 NFS1Q9Y697 457 aa13.2□□□□□ -0.3
SNF8-206ENST00000509989 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 CCDC88CQ9P219 2028 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 OR5K3A6NET4 321 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 CCDC188H7C350 402 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 AP3B1O00203 1094 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 BTN3A1O00481 513 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 LIN7AO14910 233 aaPredicted RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 KLK10O43240 276 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 NDUFS3O75489 264 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 FTH1P02794 183 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 ZNF28P17035 718 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 GABRB3P28472 473 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 CSTF2P33240 577 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNF8-206ENST00000509989 ELK3P41970 407 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 SLC1A2P43004 574 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 TTPAP49638 278 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNF8-206ENST00000509989 GRB7Q14451 532 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 CACHD1Q5VU97 1274 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 PTRHD1Q6GMV3 140 aaKnown RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 CNSTQ6PJW8 725 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 VASH2Q86V25 355 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 ANKMY2Q8IV38 441 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 FAM20CQ8IXL6 584 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 AGBL5Q8NDL9 886 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 CFAP61Q8NHU2 1237 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 ELMO2Q96JJ3 720 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 C20orf96Q9NUD7 363 aaPredicted RBP13.19□□□□□ -0.3
SNF8-206ENST00000509989 HRASLS2Q9NWW9 162 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 SLC39A1Q9NY26 324 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 SAMD15Q9P1V8 674 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 FAM169AQ9Y6X4 670 aa13.19□□□□□ -0.3
SNF8-206ENST00000509989 EFCAB8A8MWE9 144 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 ZW10O43264 779 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 PIAS1O75925 651 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 USP1O94782 785 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 HAUS5O94927 633 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 TIAF1O95411 115 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 PVRP15151 417 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 FOLR1P15328 257 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 RPS3P23396 243 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNF8-206ENST00000509989 PEBP1P30086 187 aaKnown RBP13.18□□□□□ -0.3
SNF8-206ENST00000509989 CD151P48509 253 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 TIAL1Q01085 375 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNF8-206ENST00000509989 MC2RQ01718 297 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 RPA4Q13156 261 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 CRYMQ14894 314 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 SYTL3Q4VX76 610 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 HSP90AA5PQ58FG0 334 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 TIPARPQ7Z3E1 657 aaKnown RBP13.18□□□□□ -0.3
SNF8-206ENST00000509989 TRIM73Q86UV7 250 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 HOOK3Q86VS8 718 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 RBM12BQ8IXT5 1001 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms