RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
DDX41-210ENST00000509576 CCDC70Q6NSX1 233 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 KLHL35Q6PF15 583 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 TRIM73Q86UV7 250 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 RHOT2Q8IXI1 618 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 GLIS1Q8NBF1 620 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 OR52E1Q8NGJ3 308 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 ZFPM2Q8WW38 1151 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
DDX41-210ENST00000509576 ZCCHC2Q9C0B9 1178 aaKnown RBP12.97□□□□□ -0.33
DDX41-210ENST00000509576 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 CASS4Q9NQ75 786 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 C1GALT1Q9NS00 363 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
DDX41-210ENST00000509576 LCMT1Q9UIC8 334 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 ACSL5Q9ULC5 683 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 SNX7Q9UNH6 387 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 CSAG2Q9Y5P2 127 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 TEP1Q99973 2627 aaKnown RBP12.97□□□□□ -0.33
DDX41-210ENST00000509576 FBN2P35556 2912 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 STX7O15400 261 aaKnown RBP12.96□□□□□ -0.33
DDX41-210ENST00000509576 LDB2O43679 373 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 ITGAXP20702 1163 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 CDH3P22223 829 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 PREPP48147 710 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 ARL4DP49703 201 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 VAV2P52735 878 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 SPARCL1Q14515 664 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 NCF4Q15080 339 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.33
DDX41-210ENST00000509576 LONRF2Q1L5Z9 754 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 ZDHHC20Q5W0Z9 365 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 AADACL2Q6P093 401 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 VSTM4Q8IW00 320 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 KLHDC8BQ8IXV7 354 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 PIANPQ8IYJ0 282 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 NXPE1Q8N323 547 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 LMNTD1Q8N9Z9 388 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 OR8K5Q8NH50 307 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 CPT1BQ92523 772 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 SNRNP40Q96DI7 357 aaKnown RBP12.96□□□□□ -0.33
DDX41-210ENST00000509576 HEMGNQ9BXL5 484 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 ACTR5Q9H9F9 607 aaPredicted RBP12.96□□□□□ -0.33
DDX41-210ENST00000509576 SLC22A11Q9NSA0 550 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 ASF1BQ9NVP2 202 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 PKP3Q9Y446 797 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.96□□□□□ -0.334e-7■■■□□ 16.1
DDX41-210ENST00000509576 PRSS21Q9Y6M0 314 aa12.96□□□□□ -0.33
DDX41-210ENST00000509576 TRBV5-4A0A0C4DH59 114 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 ZNF749O43361 778 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 SPOPO43791 374 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 CBX6O95503 412 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 LDLRP01130 860 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 SLC35G4P0C7Q5 338 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 PEBP1P30086 187 aaKnown RBP12.95□□□□□ -0.34
DDX41-210ENST00000509576 SLC1A1P43005 524 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 HADHBP55084 474 aaKnown RBP12.95□□□□□ -0.34
DDX41-210ENST00000509576 GSDMDP57764 484 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 TFDP2Q14188 446 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 TFDP3Q5H9I0 405 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 CYB5D1Q6P9G0 228 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 BBS12Q6ZW61 710 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 MRGPREQ86SM8 312 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 FAM20CQ8IXL6 584 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 KATNAL2Q8IYT4 538 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 CARFQ8N187 725 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 CLDN19Q8N6F1 224 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 ACVR1CQ8NER5 493 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 HM13Q8TCT9 377 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 SEC14L1Q92503 715 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 P3H4Q92791 437 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 HGH1Q9BTY7 390 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 SPRTNQ9H040 489 aaPredicted RBP12.95□□□□□ -0.34
DDX41-210ENST00000509576 DEF6Q9H4E7 631 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 SPHK1Q9NYA1 384 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX41-210ENST00000509576 ZNF451Q9Y4E5 1061 aa12.95□□□□□ -0.34
DDX41-210ENST00000509576 CCDC66A2RUB6 948 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 GSAPA4D1B5 854 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 UMODP07911 640 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 DCTP40126 519 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 GCGRP47871 477 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 PDE1BQ01064 536 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
DDX41-210ENST00000509576 PRKG2Q13237 762 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 BOP1Q14137 746 aaKnown RBP12.94□□□□□ -0.34
DDX41-210ENST00000509576 NR6A1Q15406 480 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 NAPRTQ6XQN6 538 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 ACTL9Q8TC94 416 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 LCN9Q8WX39 176 aa12.94□□□□□ -0.34
DDX41-210ENST00000509576 PNPLA2Q96AD5 504 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms