RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 AOAHP28039 575 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 UCNP55089 124 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 SH3BP2P78314 561 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 PRKG2Q13237 762 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 PLCL1Q15111 1095 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 AARS2Q5JTZ9 985 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 GPR155Q7Z3F1 870 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 SDCCAG8Q86SQ7 713 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 NKD1Q969G9 470 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 TEFMQ96QE5 360 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 TCF12Q99081 682 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 MAP3K3Q99759 626 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 TRIM56Q9BRZ2 755 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 ZPBPQ9BS86 351 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 PILRAQ9UKJ1 303 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 PCDHB11Q9Y5F2 797 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 IGSF10Q6WRI0 2623 aa15.7■□□□□ 0.1
PDLIM5-212ENST00000509333 CTAGE9A4FU28 777 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 F8W8V4 182 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 GOLGA8TH3BQL2 631 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 BTN3A3O00478 584 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 NDUFS3O75489 264 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 RASSF9O75901 435 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 SLCO2B1O94956 709 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 POLR2CP19387 275 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 RPS3P23396 243 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 CXADRP78310 365 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 VAC14Q08AM6 782 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 SRSF6Q13247 344 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 RNASEH2BQ5TBB1 312 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 ARHGAP40Q5TG30 622 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 KIAA0930Q6ICG6 404 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 NEPROQ6NW34 567 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 CEACAM20Q6UY09 585 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 VRK3Q8IV63 474 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 KRT222Q8N1A0 295 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 LKAAEAR1Q8TD35 194 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 ASZ1Q8WWH4 475 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 LCN9Q8WX39 176 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 UBXN4Q92575 508 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 BIRC8Q96P09 236 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 SRMSQ9H3Y6 488 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 SDK2Q58EX2 2172 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 CACNA1GO43497 2377 aa15.69■□□□□ 0.1
PDLIM5-212ENST00000509333 ZCWPW2A0A1B0GU75 182 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 STMND1H3BQB6 276 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 K7ENP7 123 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 S1PR4O95977 384 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 TMPRSS3P57727 454 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 HSPA14Q0VDF9 509 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 PTK6Q13882 451 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 IL11RAQ14626 422 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 MRNIPQ6NTE8 343 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 CASC4Q6P4E1 433 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 INO80CQ6PI98 192 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 CCDC81Q6ZN84 652 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 CENPUQ71F23 418 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 TIPARPQ7Z3E1 657 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 OOSP2Q86WS3 158 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 LRRC6Q86X45 466 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 SLC22A15Q8IZD6 547 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 OR52E1Q8NGJ3 308 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 PPM1MQ96MI6 270 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 CD180Q99467 661 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 RNF14Q9UBS8 474 aa15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 TMEM184BQ9Y519 407 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-212ENST00000509333 DNALI1O14645 258 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 FGF5P12034 268 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 FOLR1P15328 257 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 PRDX3P30048 256 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 FMO4P31512 558 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 KPNA2P52292 529 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 CSE1LP55060 971 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 FOXM1Q08050 763 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 ABRQ12979 859 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 DHX34Q14147 1143 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 SOWAHCQ53LP3 525 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 DNTTIP2Q5QJE6 756 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 PTRHD1Q6GMV3 140 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 ARMC6Q6NXE6 501 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 FBXO38Q6PIJ6 1188 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 PCGF5Q86SE9 256 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 AMIGO1Q86WK6 493 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 TBC1D21Q8IYX1 336 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 ADGRF3Q8IZF5 1079 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 OR5AR1Q8NGP9 310 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 LPGAT1Q92604 370 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 OR6C1Q96RD1 312 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 TWSG1Q9GZX9 223 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 XKR8Q9H6D3 395 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 LATS2Q9NRM7 1088 aa15.67■□□□□ 0.1
PDLIM5-212ENST00000509333 POLG2Q9UHN1 485 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms