RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PRSS55Q6UWB4 352 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RSPO2Q6UXX9 243 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 BZW1Q7L1Q6 419 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 P4HA3Q7Z4N8 544 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TSPAN33Q86UF1 283 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CIR1Q86X95 450 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ATP6V0D2Q8N8Y2 350 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 VCPIP1Q96JH7 1222 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ZBTB45Q96K62 511 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OSBPL9Q96SU4 736 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KCNK16Q96T55 309 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OSBPL8Q9BZF1 889 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CTDSP1Q9GZU7 261 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TFB2MQ9H5Q4 396 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLC6A13Q9NSD5 602 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 IGSF9Q9P2J2 1179 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 FBXL17Q9UF56 701 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HMGXB4Q9UGU5 601 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 UBQLN2Q9UHD9 624 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DUSP13Q9UII6 198 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 STOML2Q9UJZ1 356 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RNF215Q9Y6U7 377 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ABCB11O95342 1321 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CYP2D7A0A087X1C5 515 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OOEPA6NGQ2 149 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 C9JVG2 144 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 BTN3A3O00478 584 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CLDN3O15551 220 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ATP9AO75110 1047 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 APBB3O95704 486 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TGM6O95932 706 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ALBP02768 609 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HMGCRP04035 888 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ANXA6P08133 673 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ELFN1P0C7U0 828 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 GIMD1P0DJR0 217 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DPEP1P16444 411 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TSPAN8P19075 237 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CYP2B6P20813 491 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 AHCYP23526 432 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TOB1P50616 345 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TXNL4AP83876 142 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CHRNB3Q05901 458 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 STX3Q13277 289 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLC14A1Q13336 389 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ADAM9Q13443 819 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CYTH1Q15438 398 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KANK2Q63ZY3 851 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KIAA0930Q6ICG6 404 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 LRIG3Q6UXM1 1119 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KBTBD6Q86V97 674 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SATL1Q86VE3 508 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ADAMTS18Q8TE60 1221 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF775Q96BV0 537 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLC46A1Q96NT5 459 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 WDFY2Q96P53 400 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLC29A1Q99808 456 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PELOQ9BRX2 385 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 COPS4Q9BT78 406 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ALG12Q9BV10 488 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DENND2DQ9H6A0 471 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SYNPO2LQ9H987 977 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 NEK6Q9HC98 313 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 COL11A1P12107 1806 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RLFQ13129 1914 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 FRMPD4Q14CM0 1322 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DPPA5A6NC42 116 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 VWA3AA6NCI4 1184 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ZSCAN5CA6NGD5 496 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 YDJCA8MPS7 323 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 H3BS24 57 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 BCKDKO14874 412 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HGSO14964 777 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ZBTB5O15062 677 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SUN1O94901 812 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLCO2B1O94956 709 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PRAMEF1O95521 474 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HRGP04196 525 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TUBB4AP04350 444 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 AKR1A1P14550 325 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 POU3F2P20265 443 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 UGT1A4P22310 534 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SSTR1P30872 391 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 UGT1A3P35503 534 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 UGT1A5P35504 534 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MAGEA2P43356 314 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ALDH7A1P49419 539 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MMP16P51512 607 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CYP2J2P51589 502 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 GEMP55040 296 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HUNKP57058 714 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 NONOQ15233 471 aaKnown RBP eCLIP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 NPY5RQ15761 445 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CERKLQ49MI3 558 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 Q4G0T1 1027 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TRIM61Q5EBN2 209 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RAB41Q5JT25 222 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 NT5DC3Q86UY8 548 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms