RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 LACRTQ9GZZ8 138 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 ACTL8Q9H568 366 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 ZNF71Q9NQZ8 489 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 FARSAQ9Y285 508 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 MRPS18BQ9Y676 258 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 SGTAO43765 313 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 NTRK1P04629 796 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 POLR2CP19387 275 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 PSMA3P25788 255 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 CA5AP35218 305 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 FDFT1P37268 417 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 PPP1CAP62136 330 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 CDH17Q12864 832 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 KCNAB1Q14722 419 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 PACS1Q6VY07 963 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 RAD9BQ6WBX8 426 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 CERS6Q6ZMG9 384 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 ZNF517Q6ZMY9 492 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 NLRP9Q7RTR0 991 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 AMIGO1Q86WK6 493 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 FAM71DQ8N9W8 422 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 MR1Q95460 341 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 DNAJC1Q96KC8 554 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 TSSK1BQ9BXA7 367 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 TSGA10Q9BZW7 698 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 SLC7A5P2Q9GIP4 190 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 OR52A5Q9H2C5 316 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 FAM8A1Q9UBU6 413 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 RIMKLBQ9ULI2 386 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 PCDHGB7Q9Y5F8 929 aa13.22□□□□□ -0.29
CCHCR1-227ENST00000508852 HEATR9A2RTY3 570 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 KLHL41O60662 606 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 OR56A5P0C7T3 313 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 CYP2A7P20853 494 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 PRDX3P30048 256 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 SHMT2P34897 504 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 PREPP48147 710 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 KLF1Q13351 362 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 SEMA5AQ13591 1074 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 SEL1L2Q5TEA6 688 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 DUS1LQ6P1R4 473 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 ATCAYQ86WG3 371 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 DNAAF3Q8N9W5 541 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 SLC35B2Q8TB61 432 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 PEX13Q92968 403 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 CLIP3Q96DZ5 547 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 NLNQ9BYT8 704 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 PITPNM3Q9BZ71 974 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 CHRNA10Q9GZZ6 450 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 EPN3Q9H201 632 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 FAM96AQ9H5X1 160 aa13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 REXO2Q9Y3B8 237 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 PCDHGA9Q9Y5G4 932 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-227ENST00000508852 MROH6A6NGR9 719 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 SLC9B1P1A6NJY1 282 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 AP3B1O00203 1094 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 MEN1O00255 615 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 TIAF1O95411 115 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 METTL18O95568 372 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 RPN2P04844 631 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 AGXTP21549 392 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 LMAN1P49257 510 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 FOXK1P85037 733 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 OLIG2Q13516 323 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 BOP1Q14137 746 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 POU6F1Q14863 301 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 GPR19Q15760 415 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 ATP1A1-AS1Q5TC04 95 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 C4orf22Q6V702 233 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 ASB18Q6ZVZ8 466 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 TBC1D21Q8IYX1 336 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 GPR135Q8IZ08 494 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 DSELQ8IZU8 1212 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 ACRBPQ8NEB7 543 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 DENND1AQ8TEH3 1009 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 N4BP2L2Q92802 583 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 TCTN2Q96GX1 697 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 HES6Q96HZ4 224 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 FAM118BQ9BPY3 351 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 DHRS4Q9BTZ2 278 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 ACSS2Q9NR19 701 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 OR6C2Q9NZP2 312 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 TLK1Q9UKI8 766 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 SNX7Q9UNH6 387 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 TP53TG5Q9Y2B4 290 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 PADI2Q9Y2J8 665 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 AP1M2Q9Y6Q5 423 aa13.2□□□□□ -0.3
CCHCR1-227ENST00000508852 C9J4A7 227 aa13.19□□□□□ -0.3
CCHCR1-227ENST00000508852 E7EQ34 232 aa13.19□□□□□ -0.3
CCHCR1-227ENST00000508852 E7EVH7 732 aa13.19□□□□□ -0.3
CCHCR1-227ENST00000508852 KRT86O43790 486 aa13.19□□□□□ -0.3
CCHCR1-227ENST00000508852 SUN1O94901 812 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms