RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PYCARD-AS1I3L0S3 204 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 K7EPI3 171 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CLIC1O00299 241 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SCO2O43819 266 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TUSC2O75896 110 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RSL1D1O76021 490 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ZBTB11O95625 1053 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ALPLP05186 524 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 KRT8P05787 483 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 S100A6P06703 90 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SERPINA6P08185 405 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CTSAP10619 480 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PSG1P11464 419 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 EEF2P13639 858 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 GFAPP14136 432 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ITIH1P19827 911 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 IL4RP24394 825 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 IL12AP29459 219 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 NMT1P30419 496 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RFC1P35251 1148 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 IGHMBP2P38935 993 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PRIM2P49643 509 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CCR3P51677 355 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CASP5P51878 434 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 IST1P53990 364 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ALDH18A1P54886 795 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TMBIM6P55061 237 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SUMO3P55854 103 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 POLR2FP61218 127 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RPS13P62277 151 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 YPEL5P62699 121 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TIAL1Q01085 375 aaKnown RBP eCLIP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CFHR3Q02985 330 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC14A1Q13336 389 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 UBE4AQ14139 1066 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SELPLGQ14242 412 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MFSD13AQ14CX5 517 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 OXA1LQ15070 435 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 DLGAP5Q15398 846 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 KCNJ8Q15842 424 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MTHFSDQ2M296 383 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 KLHL38Q2WGJ6 581 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RABL6Q3YEC7 729 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 FSCBQ5H9T9 825 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RABGAP1LQ5R372 815 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 IRAK1BP1Q5VVH5 260 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 KRT39Q6A163 491 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CGB2Q6NT52 195 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SWSAP1Q6NVH7 229 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RFWD3Q6PCD5 774 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 XKRXQ6PP77 449 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 DEF8Q6ZN54 512 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 FASTKD5Q7L8L6 764 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 OTOAQ7RTW8 1153 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ANKS1BQ7Z6G8 1248 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ADAMTSL2Q86TH1 951 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SETD3Q86TU7 594 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TRABD2AQ86V40 505 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 GPR180Q86V85 440 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 HORMAD1Q86X24 394 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TTC5Q8N0Z6 440 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CPSF7Q8N684 471 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ANKRD13CQ8N6S4 541 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PACRGLQ8N7B6 248 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PAF1Q8N7H5 531 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF713Q8N859 430 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SNX31Q8N9S9 440 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 BEST2Q8NFU1 509 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 LILRB1Q8NHL6 650 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 RFWD2Q8NHY2 731 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 GSDMBQ8TAX9 411 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 U2AF1L4Q8WU68 220 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PEX13Q92968 403 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TXNDC15Q96J42 360 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 DNAJC1Q96KC8 554 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MARK4Q96L34 752 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PSKH2Q96QS6 385 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CDRT15Q96T59 188 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 DOK1Q99704 481 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 COQ7Q99807 217 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 GON7Q9BXV9 100 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 BRINP2Q9C0B6 783 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PRO3102Q9H379 93 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SMARCAD1Q9H4L7 1026 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 SLA2Q9H6Q3 261 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 LRRC19Q9H756 370 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC177Q9NQR7 707 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 MTMR10Q9NXD2 777 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 KIF17Q9P2E2 1029 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 PSMC3IPQ9P2W1 217 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 CPNE7Q9UBL6 633 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 UBA2Q9UBT2 640 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 KCNN3Q9UGI6 736 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 STOML2Q9UJZ1 356 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 ITGA11Q9UKX5 1188 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 NUP50Q9UKX7 468 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 TFR2Q9UP52 801 aa4.54□□□□□ -1.68
PDLIM5-211ENST00000508531 DNAJC16Q9Y2G8 782 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms