RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CST8O60676 142 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CPNE3O75131 537 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TULP3O75386 442 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NDUFA10O95299 355 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 LATS1O95835 1130 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 APOA1P02647 267 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ABCB1P08183 1280 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NDUFS1P28331 727 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 IL12BP29460 328 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 P2RY2P41231 377 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CARSP49589 748 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 STK19P49842 368 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NUDT2P50583 147 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 AIF1P55008 147 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SLC7A9P82251 487 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RHAGQ02094 409 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HHEXQ03014 270 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 KLC1Q07866 573 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SNTA1Q13424 505 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 C1DQ13901 141 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 EFR3AQ14156 821 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CSRP2Q16527 193 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FUT11Q495W5 492 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ARHGAP17Q68EM7 881 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TCEAL6Q6IPX3 200 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MSANTD2Q6P1R3 559 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 BRAT1Q6PJG6 821 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ERMP1Q7Z2K6 904 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 LRRTM4Q86VH4 590 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ATP6V1C2Q8NEY4 427 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR10H5Q8NGA6 315 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR8H1Q8NGG4 311 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TCEAL3Q969E4 200 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC39Q96DD0 335 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 VCPIP1Q96JH7 1222 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ARL5BQ96KC2 179 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZMAT2Q96NC0 199 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCM2Q9BSQ5 444 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NAT9Q9BTE0 207 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC1BQ9P126 229 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FAM153AQ9UHL3 310 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GLS2Q9UI32 602 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DKKL1Q9UK85 242 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 BLOC1S6Q9UL45 172 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PAIP2BQ9ULR5 123 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RALGAPA1Q6GYQ0 2036 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TTC26A0AVF1 554 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SOBPA7XYQ1 873 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ACOT7O00154 380 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DDX3XO00571 662 aaKnown RBP eCLIP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TFECO14948 347 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 AHSA1O95433 338 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PLATP00750 562 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PNMA6AP0CW24 399 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 BMP4P12644 408 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ADRB3P13945 408 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 UCHL3P15374 230 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SLC7A1P30825 629 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HOXC13P31276 330 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCKBRP32239 447 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR1D5P58170 312 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 S100A12P80511 92 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SOX4Q06945 474 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ILF2Q12905 390 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FNBP1LQ5T0N5 605 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 KLHDC7AQ5VTJ3 777 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 AFTPHQ6ULP2 937 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RASSF6Q6ZTQ3 369 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HTR3DQ70Z44 454 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GAREM2Q75VX8 874 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 AMZ2Q86W34 360 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 C12orf56Q8IXR9 622 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC116Q8IYX3 515 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 APCDD1Q8J025 514 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FBXL16Q8N461 479 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CDYL2Q8N8U2 506 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SMYD1Q8NB12 490 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NAXEQ8NCW5 288 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 WDR36Q8NI36 951 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC4CQ8WTT0 213 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RBM18Q96H35 190 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 APOOQ9BUR5 198 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 KLF16Q9BXK1 252 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 IRX2Q9BZI1 471 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SLITRK2Q9H156 845 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 C3orf14Q9HBI5 128 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TM9SF3Q9HD45 589 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SERINC1Q9NRX5 453 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ARL15Q9NXU5 204 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TAS2R13Q9NYV9 303 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PDP2Q9P2J9 529 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CTNNAL1Q9UBT7 734 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RCOR1Q9UKL0 485 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SNX24Q9Y343 169 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PCDHGA5Q9Y5G8 931 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CABIN1Q9Y6J0 2220 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM191CA6NGB0 347 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SRRM3A6NNA2 597 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 LGALS16A8MUM7 142 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms