RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 C16orf96A6NNT2 1141 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 CFAP99D6REC4 459 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 QSOX1O00391 747 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 IFRD1O00458 451 aaPredicted RBP17.3■□□□□ 0.36
SFXN1-208ENST00000507823 HMOX2P30519 316 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 SLC6A12P48065 614 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 RPIAP49247 311 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 HNMTP50135 292 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 POLR2JP52435 117 aaKnown RBP17.3■□□□□ 0.36
SFXN1-208ENST00000507823 ADGRD2Q7Z7M1 963 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 TMEM102Q8N9M5 508 aaPredicted RBP17.3■□□□□ 0.36
SFXN1-208ENST00000507823 SCAMP4Q969E2 229 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 ATP6V1E2Q96A05 226 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 DCUN1D1Q96GG9 259 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 SLC39A3Q9BRY0 314 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 PCDHAC1Q9H158 963 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 SLC32A1Q9H598 525 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 CMTM6Q9NX76 183 aa17.3■□□□□ 0.36
SFXN1-208ENST00000507823 LEF1Q9UJU2 399 aaPredicted RBP17.3■□□□□ 0.36
SFXN1-208ENST00000507823 ARNTLO00327 626 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 SLC28A1O00337 649 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 TULP3O75386 442 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 KATNA1O75449 491 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 EPB42P16452 691 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 TCN1P20061 433 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-208ENST00000507823 GDF5P43026 501 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 ZXDCQ2QGD7 858 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-208ENST00000507823 PRR23BQ6ZRT6 265 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 ADCY4Q8NFM4 1077 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 CHD7Q9P2D1 2997 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 C2orf16Q68DN1 1984 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 FADS2P1A8MWK0 482 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 SLCO2B1O94956 709 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 JAK1P23458 1154 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 ETV3P41162 512 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 BNIP2Q12982 314 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 GPM6BQ13491 265 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 KCNC3Q14003 757 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 UBE2R2Q712K3 238 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-208ENST00000507823 SPATA24Q86W54 205 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 CATSPER1Q8NEC5 780 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 BTN2A2Q8WVV5 523 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 ABCG8Q9H221 673 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 ANGPTL3Q9Y5C1 460 aa17.29■□□□□ 0.36
SFXN1-208ENST00000507823 KIAA1549LQ6ZVL6 1849 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 A6NHS1 94 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 NPIPB8E9PQR5 432 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 H0Y858 1186 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 PIM1P11309 404 aaPredicted RBP17.28■□□□□ 0.36
SFXN1-208ENST00000507823 AP1S2P56377 157 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 PRKG2Q13237 762 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 SERPINA13PQ6UXR4 307 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 LIPIQ6XZB0 460 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 VRK3Q8IV63 474 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 TMEM125Q96AQ2 219 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 ASB16Q96NS5 453 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 C1orf50Q9BV19 199 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 RIOK2Q9BVS4 552 aaKnown RBP17.28■□□□□ 0.36
SFXN1-208ENST00000507823 MUC13Q9H3R2 512 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 MTG2Q9H4K7 406 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 PIDD1Q9HB75 910 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 OBP2AQ9NY56 170 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 LOC730098B7Z3J9 87 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 RGS14O43566 566 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 FTH1P02794 183 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 SLC7A1P30825 629 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 KIAA0040Q15053 153 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 FXNQ16595 210 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 DUSP6Q16828 381 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 AP5B1Q2VPB7 878 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 PAGE3Q5JUK9 113 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 LDLRAP1Q5SW96 308 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 CYP20A1Q6UW02 462 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 MBOAT1Q6ZNC8 495 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 PARS2Q7L3T8 475 aaKnown RBP17.28■□□□□ 0.36
SFXN1-208ENST00000507823 NPAS3Q8IXF0 933 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 BPIFB1Q8TDL5 484 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 SLCO4A1Q96BD0 722 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 TRPV4Q9HBA0 871 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 ARL15Q9NXU5 204 aa17.28■□□□□ 0.36
SFXN1-208ENST00000507823 KCNE1BA0A087WTH5 132 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 SERTM1A2A2V5 107 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 CCDC154A6NI56 674 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 C9JVG2 144 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 MANBAO00462 879 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 SPINT1O43278 529 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 SMNDC1O75940 238 aaKnown RBP eCLIP17.27■□□□□ 0.36
SFXN1-208ENST00000507823 NFATC1O95644 943 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 AKT1P31749 480 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 VIPR2P41587 438 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 MAD2L1Q13257 205 aaPredicted RBP17.27■□□□□ 0.36
SFXN1-208ENST00000507823 NR6A1Q15406 480 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 FAM78AQ5JUQ0 283 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 RARS2Q5T160 578 aaKnown RBP17.27■□□□□ 0.36
SFXN1-208ENST00000507823 LCN8Q6JVE9 175 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 CYP2U1Q7Z449 544 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 TMIEQ8NEW7 156 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 UCMAQ8WVF2 138 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 LRGUKQ96M69 825 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 COQ10AQ96MF6 247 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms