RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 FBXL17Q9UF56 701 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 VPS51Q9UID3 782 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TRMT6Q9UJA5 497 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 HAO1Q9UJM8 370 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 HPSEQ9Y251 543 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SLC9A8Q9Y2E8 581 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PLEKHA6Q9Y2H5 1048 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PCDHB2Q9Y5E7 798 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PCDHGA5Q9Y5G8 931 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 LIPGQ9Y5X9 500 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A18PA6NE21 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A16PA6NEW6 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 OR2W5A6NFC9 320 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A20PA6NIJ5 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MBD3L5A6NJ08 208 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A9PA6NNJ1 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A5PA8MXJ8 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KCNU1A8MYU2 1149 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KIF28PB7ZC32 967 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 H0YIZ8 118 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF213O14771 459 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MITFO75030 526 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 RPP40O75818 363 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 UNC5CO95185 931 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 OR2C1O95371 312 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ONECUT2O95948 504 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 TOP3BO95985 862 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 LIPFP07098 398 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A15PP0C7V4 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM90A14PP0C7W9 464 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PRPS2P11908 318 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF24P17028 368 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 VCLP18206 1134 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GABRB1P18505 474 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PKLRP30613 574 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 RRM2P31350 389 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ETV5P41161 510 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 WNT5AP41221 380 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MMP13P45452 471 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GABRB2P47870 512 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PTDSS1P48651 473 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF75DP51815 510 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PLTPP55058 493 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 UCP3P55916 312 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 TAS2R40P59535 323 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 EFNB1P98172 346 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PMP22Q01453 160 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ACSM2AQ08AH3 577 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 NCBP1Q09161 790 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PPIGQ13427 754 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GRAPQ13588 217 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GRM4Q14833 912 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 NAB2Q15742 525 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 SGCBQ16585 318 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MCMDC2Q4G0Z9 681 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PPP6R3Q5H9R7 873 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 C6orf136Q5SQH8 315 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GCNT6Q5T4J0 391 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 CARD17Q5XLA6 110 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ATG9BQ674R7 924 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ACSM2BQ68CK6 577 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PTRHD1Q6GMV3 140 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GLDNQ6ZMI3 551 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF813Q6ZN06 617 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MTSS1LQ765P7 747 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 DET1Q7L5Y6 550 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 EFL1Q7Z2Z2 1120 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KRT27Q7Z3Y8 459 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 STX12Q86Y82 276 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ERO1BQ86YB8 467 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PDSS2Q86YH6 399 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 NKAIN4Q8IVV8 208 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 SIAH3Q8IW03 269 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GUF1Q8N442 669 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 SLC25A41Q8N5S1 370 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 RNF10Q8N5U6 811 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KCNH5Q8NCM2 988 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 CADM4Q8NFZ8 388 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 CCDC12Q8WUD4 166 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MITD1Q8WV92 249 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 GLMPQ8WWB7 406 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 CNOT9Q92600 299 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 SYN2Q92777 582 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 EXT2Q93063 718 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 RNFT2Q96EX2 444 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM227BQ96M60 508 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF558Q96NG5 402 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 INTS14Q96SY0 518 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PAFAH2Q99487 392 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KCNS3Q9BQ31 491 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 JPH2Q9BR39 696 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 C17orf80Q9BSJ5 609 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 H2AFJQ9BTM1 129 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZSCAN5AQ9BUG6 496 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 TRIM62Q9BVG3 475 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 C1orf43Q9BWL3 253 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 PHF7Q9BWX1 381 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 IFIH1Q9BYX4 1025 aaKnown RBP3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 B3GNT4Q9C0J1 378 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms