RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 PDLIM5Q96HC4 596 aaKnown RBP12.72□□□□□ -0.37
SPDL1-206ENST00000507232 NSMCE2Q96MF7 247 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 BEGAINQ9BUH8 593 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 C9orf16Q9BUW7 83 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 THUMPD3Q9BV44 507 aaKnown RBP12.72□□□□□ -0.37
SPDL1-206ENST00000507232 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 EPB41L1Q9H4G0 881 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 LTB4R2Q9NPC1 389 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 PFDN4Q9NQP4 134 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 SLC6A13Q9NSD5 602 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
SPDL1-206ENST00000507232 DMTF1Q9Y222 760 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 COL4A6Q14031 1691 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 C5orf42Q9H799 3197 aa12.72□□□□□ -0.37
SPDL1-206ENST00000507232 KANSL1LA0AUZ9 987 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 GFRA2O00451 464 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 CLOCKO15516 846 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 RASAL1O95294 804 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 IGSF6O95976 241 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 UGT2B4P06133 528 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 GPIP06744 558 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 ENO2P09104 434 aaPredicted RBP12.71□□□□□ -0.37
SPDL1-206ENST00000507232 LHCGRP22888 699 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 CCR7P32248 378 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 B4GALNT1Q00973 533 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 INTS11Q5TA45 600 aaKnown RBP12.71□□□□□ -0.37
SPDL1-206ENST00000507232 ANKRD46Q86W74 232 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 VRK3Q8IV63 474 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 NXPE1Q8N323 547 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 AURKBQ96GD4 344 aaPredicted RBP12.71□□□□□ -0.37
SPDL1-206ENST00000507232 CEP295NLQ96MC4 621 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 HAUS8Q9BT25 410 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 CLK4Q9HAZ1 481 aaKnown RBP12.71□□□□□ -0.37
SPDL1-206ENST00000507232 HCFC1R1Q9NWW0 138 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 SLCO3A1Q9UIG8 710 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 TMCO1Q9UM00 188 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 FADS3Q9Y5Q0 445 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 CDH23Q9H251 3354 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 OBSL1O75147 1896 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 SCN8AQ9UQD0 1980 aa12.71□□□□□ -0.37
SPDL1-206ENST00000507232 TGM5O43548 720 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 RGS14O43566 566 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 ULK1O75385 1050 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 LRATO95237 230 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 LDLRP01130 860 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 C1QCP02747 245 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 ACRP10323 421 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 SRCP12931 536 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 RPS3P23396 243 aaKnown RBP eCLIP12.71□□□□□ -0.38
SPDL1-206ENST00000507232 SERPINA4P29622 427 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 PTSQ03393 145 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 GRIK2Q13002 908 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 BOP1Q14137 746 aaKnown RBP12.71□□□□□ -0.38
SPDL1-206ENST00000507232 CRY1Q16526 586 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 ZXDCQ2QGD7 858 aaPredicted RBP12.71□□□□□ -0.38
SPDL1-206ENST00000507232 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.38
SPDL1-206ENST00000507232 SPRED1Q7Z699 444 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 HS3ST5Q8IZT8 346 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 CHST14Q8NCH0 376 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 TSPEARQ8WU66 669 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 SLC22A17Q8WUG5 538 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.38
SPDL1-206ENST00000507232 CORO1BQ9BR76 489 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 HERC2P3Q9BVR0 1158 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 DPY30Q9C005 99 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 ARL15Q9NXU5 204 aa12.71□□□□□ -0.38
SPDL1-206ENST00000507232 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
SPDL1-206ENST00000507232 K7EPI3 171 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 LEFTY2O00292 366 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 MANBAO00462 879 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 GSTA4O15217 222 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 CCL16O15467 120 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 PDYNP01213 254 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 TCF3P15923 654 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 CDH2P19022 906 aaPredicted RBP12.7□□□□□ -0.38
SPDL1-206ENST00000507232 HTR1EP28566 365 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 HLA-FP30511 346 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 RPS9P46781 194 aaKnown RBP12.7□□□□□ -0.38
SPDL1-206ENST00000507232 PWP1Q13610 501 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 MAP7Q14244 749 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 KIAA0040Q15053 153 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
SPDL1-206ENST00000507232 SLC36A3Q495N2 470 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 TMTC4Q5T4D3 741 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 SERPINA13PQ6UXR4 307 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 C10orf111Q8N326 155 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 BEND7Q8N7W2 519 aaPredicted RBP12.7□□□□□ -0.38
SPDL1-206ENST00000507232 OR2AP1Q8NGE2 309 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 SLC13A3Q8WWT9 602 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 VOPP1Q96AW1 172 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 ZNF583Q96ND8 569 aa12.7□□□□□ -0.38
SPDL1-206ENST00000507232 ACTR8Q9H981 624 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms