RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 KIAA0040Q15053 153 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 AAK1Q2M2I8 961 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 TPRG1LQ5T0D9 272 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 NOTUMQ6P988 496 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 GALNT5Q7Z7M9 940 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 CELF2-AS1Q8N7Q2 184 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 ASCC1Q8N9N2 400 aaKnown RBP16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 SLC38A4Q969I6 547 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 AARSD1Q9BTE6 412 aaKnown RBP16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 C6orf62Q9GZU0 229 aaPredicted RBP16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 CATSPERBQ9H7T0 1116 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 CCDC177Q9NQR7 707 aaPredicted RBP16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 NUDT5Q9UKK9 219 aa16.81■□□□□ 0.28
SQSTM1-211ENST00000506690 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CD3EAPO15446 510 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 GLP2RO95838 553 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 KCNE1P15382 129 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CD86P42081 329 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 NRIP1P48552 1158 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CLK1P49759 484 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CLCNKBP51801 687 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 PLIN5Q00G26 463 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CYP4F3Q08477 520 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 SIM2Q14190 667 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 TSNQ15631 228 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 SMN1Q16637 294 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 MARCH8Q5T0T0 291 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 ATAD3CQ5T2N8 411 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 SHQ1Q6PI26 577 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CYP20A1Q6UW02 462 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 GPR149Q86SP6 731 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 FUBP1Q96AE4 644 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 GABARAPL1Q9H0R8 117 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 TM9SF3Q9HD45 589 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 GALPQ9UBC7 116 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 EIF3FO00303 357 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 ENPP3O14638 875 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 MMP2P08253 660 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CCR1P32246 355 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 EIF4EBP2Q13542 120 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 RBBP7Q16576 425 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 SETMARQ53H47 684 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 XKR4Q5GH76 650 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 CPZQ66K79 652 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 TMC5Q6UXY8 1006 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 PRR23CQ6ZRP0 262 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 DET1Q7L5Y6 550 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 OR56A4Q8NGH8 313 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 THUMPD3Q9BV44 507 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 ITPAQ9BY32 194 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 SYTL2Q9HCH5 934 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 FBXL12Q9NXK8 326 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 VNN3Q9NY84 501 aa16.8■□□□□ 0.28
SQSTM1-211ENST00000506690 IGLV3-25P01717 112 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 PRKCAP17252 672 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 IL1RNP18510 177 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 HTR7P34969 479 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 LIPAP38571 399 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 SIRPB2Q5JXA9 342 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 MRNIPQ6NTE8 343 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 PAQR3Q6TCH7 311 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 SPATC1Q76KD6 591 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 NLGN4XQ8N0W4 816 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 PCED1BQ96HM7 432 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 CDADC1Q9BWV3 514 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 RIBC2Q9H4K1 309 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 CDH9Q9ULB4 789 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 MRPL42Q9Y6G3 142 aaKnown RBP16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 GBF1Q92538 1859 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 DSCR3O14972 297 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 AIREO43918 545 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 OR4F21O95013 312 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 ALX3O95076 343 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 SNX4O95219 450 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 ZNF286BP0CG31 522 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 CYP4B1P13584 511 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 EFNA1P20827 205 aaPredicted RBP16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 HTR3AP46098 478 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 PPP3CCP48454 512 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 KRT6CP48668 564 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 GJC2Q5T442 439 aaPredicted RBP16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 ZNF544Q6NX49 715 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 MICU2Q8IYU8 434 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 CDYL2Q8N8U2 506 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 GTF2H4Q92759 462 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 QPCTLQ9NXS2 382 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 HECAQ9UBI9 543 aaPredicted RBP16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 GINS2Q9Y248 185 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 MED16Q9Y2X0 877 aa16.79■□□□□ 0.28
SQSTM1-211ENST00000506690 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
SQSTM1-211ENST00000506690 CDC7O00311 574 aa16.78■□□□□ 0.28
SQSTM1-211ENST00000506690 FAM20BO75063 409 aa16.78■□□□□ 0.28
SQSTM1-211ENST00000506690 PAGE1O75459 146 aa16.78■□□□□ 0.28
SQSTM1-211ENST00000506690 CREG1O75629 220 aa16.78■□□□□ 0.28
SQSTM1-211ENST00000506690 PARNO95453 639 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-211ENST00000506690 ALOX12P18054 663 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms