RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RPS6KA6Q9UK32 745 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 ZNF541Q9H0D2 1346 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 E9PI62 339 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 BLOC1S5-TXNDC5H3BN57 136 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 ERAL1O75616 437 aaKnown RBP3.55□□□□□ -1.84
CHD1-203ENST00000505657 GAS8-AS1O95177 125 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 PRSS56P0CW18 603 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 LIFP15018 202 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 SAT1P21673 171 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 HOXC8P31273 242 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 CDH11P55287 796 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 CDH13P55290 713 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 B3GALT5-AS1P59052 145 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 TUBB4BP68371 445 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 DMPKQ09013 629 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 ARHGAP11AQ6P4F7 1023 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 C15orf39Q6ZRI6 1047 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 MFSD6Q6ZSS7 791 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 DNAJC22Q8N4W6 341 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 OR5M8Q8NGP6 311 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 GRHL3Q8TE85 626 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 MTERF3Q96E29 417 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 LITAFQ99732 161 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 RHNO1Q9BSD3 238 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 FNDC11Q9BVV2 318 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 KLHL4Q9C0H6 718 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 A4GALTQ9NPC4 353 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 SIX2Q9NPC8 291 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 SLC35C2Q9NQQ7 365 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.55□□□□□ -1.84
CHD1-203ENST00000505657 ADPRHL2Q9NX46 363 aa3.55□□□□□ -1.84
CHD1-203ENST00000505657 CRNNQ9UBG3 495 aaPredicted RBP3.55□□□□□ -1.84
CHD1-203ENST00000505657 ZHX1Q9UKY1 873 aaPredicted RBP3.55□□□□□ -1.84
CHD1-203ENST00000505657 MED19A0JLT2 244 aaPredicted RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 HYKKA2RU49 373 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 ANKUB1A6NFN9 424 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 DNM1LO00429 736 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 PRAMEF11O60813 436 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 CSPG5O95196 566 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 NGFP01138 241 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 FRMD6-AS1P0C7T7 363 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 MAP2K2P36507 400 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 NR0B1P51843 470 aaKnown RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 TPD52P55327 224 aaPredicted RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 HNRNPKP61978 463 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHD1-203ENST00000505657 RPS18P62269 152 aaKnown RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 GNB1P62873 340 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 IFI35P80217 286 aaPredicted RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 CDK3Q00526 305 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 MRGPRG-AS1Q2M3A8 158 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 ZNF876PQ49A33 203 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 DCAF10Q5QP82 559 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 WDR78Q5VTH9 848 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 C16orf54Q6UWD8 224 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 LINGO4Q6UY18 593 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 CNBD1Q8NA66 436 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 APPL2Q8NEU8 664 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 OR1J1Q8NGS3 322 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 FGFBP3Q8TAT2 258 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 RNF128Q8TEB7 428 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 NEK1Q96PY6 1258 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 GCNAQ96QF7 691 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 MYADMQ96S97 322 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 RTP3Q9BQQ7 232 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 CENPOQ9BU64 300 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 MOV10L1Q9BXT6 1211 aaKnown RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 MMP27Q9H306 513 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 COQ3Q9NZJ6 369 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 ERRFI1Q9UJM3 462 aaPredicted RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 FBXO2Q9UK22 296 aaPredicted RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 MTUS1Q9ULD2 1270 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 SLC7A7Q9UM01 511 aa3.54□□□□□ -1.84
CHD1-203ENST00000505657 MAGED1Q9Y5V3 778 aaPredicted RBP3.54□□□□□ -1.84
CHD1-203ENST00000505657 A0A1W2PRB8 838 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 A6NL46 340 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 K7ENM7 598 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 SH2B2O14492 632 aaPredicted RBP3.53□□□□□ -1.84
CHD1-203ENST00000505657 EDIL3O43854 480 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 MED24O75448 989 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 STARD3NLO95772 234 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 APOHP02749 345 aaPredicted RBP3.53□□□□□ -1.84
CHD1-203ENST00000505657 NNMTP40261 264 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 ATP12AP54707 1039 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 CX3CL1P78423 397 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 LGALS3BPQ08380 585 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 BAATQ14032 418 aaPredicted RBP3.53□□□□□ -1.84
CHD1-203ENST00000505657 BECN1Q14457 450 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 C15orf59Q2T9L4 293 aaPredicted RBP3.53□□□□□ -1.84
CHD1-203ENST00000505657 BMP2KLQ5H9B9 411 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 MDH1BQ5I0G3 518 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 RNASEH2BQ5TBB1 312 aaKnown RBP3.53□□□□□ -1.84
CHD1-203ENST00000505657 GSG1LQ6UXU4 331 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 TMPRSS11FQ6ZWK6 438 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 ISCA2Q86U28 154 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 DNAAF5Q86Y56 855 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 TRIML1Q8N9V2 468 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
CHD1-203ENST00000505657 OR13J1Q8NGT2 312 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms