RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SLC2A6Q9UGQ3 507 aa12.79□□□□□ -0.36
DDX41-204ENST00000504807 CRLS1Q9UJA2 301 aa12.79□□□□□ -0.36
DDX41-204ENST00000504807 APCP25054 2843 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 MROH6A6NGR9 719 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 H7C0S8 307 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 BTN3A3O00478 584 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 CRTAMO95727 393 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 AP2A1O95782 977 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 ATP1B2P14415 290 aaPredicted RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 POLR2CP19387 275 aaPredicted RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 PSMA3P25788 255 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 ACRV1P26436 265 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 DLSTP36957 453 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 TNNT3P45378 269 aaPredicted RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 RPS18P62269 152 aaKnown RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 TUBB3Q13509 450 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 SEPT6Q14141 434 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 MAP7Q14244 749 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 PRPSAP1Q14558 356 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 PLCL1Q15111 1095 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 ZNF789Q5FWF6 425 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 FAM69BQ5VUD6 431 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 ARHGEF18Q6ZSZ5 1173 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 RASGRP3Q8IV61 690 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 OR52K1Q8NGK4 314 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 OR13J1Q8NGT2 312 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 CPT1CQ8TCG5 803 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 APOBEC4Q8WW27 367 aaKnown RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
DDX41-204ENST00000504807 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 CDKN2AIPNLQ96HQ2 116 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 COPS8Q99627 209 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 XKR8Q9H6D3 395 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 HRASLS2Q9NWW9 162 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 ZDHHC3Q9NYG2 299 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 LNPEPQ9UIQ6 1025 aa12.78□□□□□ -0.36
DDX41-204ENST00000504807 HCRTR1O43613 425 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 LIASO43766 372 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 PDGFAP04085 211 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 CTSBP07858 339 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 SLC35G4P0C7Q5 338 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 PVRP15151 417 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 CDC25BP30305 580 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 FOXN2P32314 431 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 ABRQ12979 859 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 IL11RAQ14626 422 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
DDX41-204ENST00000504807 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX41-204ENST00000504807 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 DNTTIP2Q5QJE6 756 aaKnown RBP12.77□□□□□ -0.37
DDX41-204ENST00000504807 TMEM151BQ8IW70 566 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 D2HGDHQ8N465 521 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 ESX1Q8N693 406 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 LMNTD1Q8N9Z9 388 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 SIDT2Q8NBJ9 832 aaKnown RBP12.77□□□□□ -0.37
DDX41-204ENST00000504807 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX41-204ENST00000504807 OR4E2Q8NGC2 313 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 HM13Q8TCT9 377 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 ZNF514Q96K75 400 aaPredicted RBP12.77□□□□□ -0.37
DDX41-204ENST00000504807 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.37
DDX41-204ENST00000504807 KLHL25Q9H0H3 589 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 ETNK1Q9HBU6 452 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 FGF21Q9NSA1 209 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 ACSL5Q9ULC5 683 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 KCNMB2Q9Y691 235 aa12.77□□□□□ -0.37
DDX41-204ENST00000504807 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
DDX41-204ENST00000504807 CCDC162PA2VCL2 907 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 TLCD2A6NGC4 264 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 SLC9B1P1A6NJY1 282 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 MIF4GDA9UHW6 222 aaKnown RBP12.76□□□□□ -0.37
DDX41-204ENST00000504807 BTN3A1O00481 513 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 OR1I1O60431 355 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
DDX41-204ENST00000504807 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
DDX41-204ENST00000504807 PRF1P14222 555 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 ITGALP20701 1170 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 KIF5AQ12840 1032 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 GPS2Q13227 327 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 SNX1Q13596 522 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 ERV3-1Q14264 604 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 ZNF534Q76KX8 674 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 PPP1R3BQ86XI6 285 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 UBL4BQ8N7F7 174 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 OR52E1Q8NGJ3 308 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 LKAAEAR1Q8TD35 194 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 UBXN4Q92575 508 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 KIAA1143Q96AT1 154 aaPredicted RBP12.76□□□□□ -0.37
DDX41-204ENST00000504807 DCUN1D1Q96GG9 259 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 TLR10Q9BXR5 811 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 LRRC40Q9H9A6 602 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 POMT2Q9UKY4 750 aa12.76□□□□□ -0.37
DDX41-204ENST00000504807 CSMD2Q7Z408 3487 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 AKAP9Q99996 3911 aa12.75□□□□□ -0.37
DDX41-204ENST00000504807 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms