RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MDC1Q14676 2089 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 FER1L5A0AVI2 2057 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 EXOC1LA0A1B0GW35 172 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 A0A1W2PPM1 405 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 C2orf72A6NCS6 295 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CFAP99D6REC4 459 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PHGDHO43175 533 aaKnown RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 SH3BP5O60239 455 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 FTH1P02794 183 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 C2P06681 752 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 RALBP11234 206 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CKMT1AP12532 417 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CD1DP15813 335 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CREB1P16220 341 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ITGB6P18564 788 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ACP1P24666 158 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 MCM3P25205 808 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PMLP29590 882 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PHBP35232 272 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CCNFP41002 786 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 SKIV2L2P42285 1042 aaKnown RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 IRF9Q00978 393 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 POU4F1Q01851 419 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ILF3Q12906 894 aaKnown RBP eCLIP4.82□□□□□ -1.641e-6■■■■□ 22.3
LMNB1-208ENST00000504788 SQSTM1Q13501 440 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CASP8Q14790 479 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PHKG1Q16816 387 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 INSCQ1MX18 579 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 KLHL38Q2WGJ6 581 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PERM1Q5SV97 790 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 MROH9Q5TGP6 573 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ZCCHC8Q6NZY4 707 aaKnown RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PIWIL4Q7Z3Z4 852 aaKnown RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 TMPRSS9Q7Z410 1059 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ISCA2Q86U28 154 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CPNE9Q8IYJ1 553 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CFAP206Q8IYR0 622 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ARL14Q8N4G2 192 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 LINC01555Q8NAE3 123 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 FBXO15Q8NCQ5 510 aaPredicted RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 LMX1AQ8TE12 382 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 UBLCP1Q8WVY7 318 aaPredicted RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ASZ1Q8WWH4 475 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ASB11Q8WXH4 323 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ELMO1Q92556 727 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 CDKL2Q92772 493 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.82□□□□□ -1.647e-6■■■■■ 27.5
LMNB1-208ENST00000504788 SKA1Q96BD8 255 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PTERQ96BW5 349 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 DCUN1D1Q96GG9 259 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PANX3Q96QZ0 392 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ATOH8Q96SQ7 321 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 GTPBP2Q9BX10 602 aaKnown RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 GSDMCQ9BYG8 508 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 SARS2Q9NP81 518 aaKnown RBP4.82□□□□□ -1.64
LMNB1-208ENST00000504788 TMEM9BQ9NQ34 198 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 SNX15Q9NRS6 342 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ZNF358Q9NW07 568 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 DLL3Q9NYJ7 618 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 NCDNQ9UBB6 729 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 EMCNQ9ULC0 261 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 ACSL5Q9ULC5 683 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 PSMD13Q9UNM6 376 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 WASF3Q9UPY6 502 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 GPSM3Q9Y4H4 160 aa4.82□□□□□ -1.64
LMNB1-208ENST00000504788 DMXL2Q8TDJ6 3036 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 KIR2DS5A0A0G2JLQ3 304 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 A0A0G2JNG1 304 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 A0A1W2PPV9 198 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 A0A1W2PQM1 296 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 ARHGEF33A8MVX0 844 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 TRIM49D1C9J1S8 452 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 POC1B-GALNT4F8VUJ3 575 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 H3BM21 787 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 KIR2DS3K7RE56 304 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 MYO1CO00159 1063 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 FLRT2O43155 660 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 B4GAT1O43505 415 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 NUDT21O43809 227 aaKnown RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 FOXD2O60548 495 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 CDH16O75309 829 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 TRIM16O95361 564 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 C1orf105O95561 183 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 MPC1LP0DKB6 136 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 CBSLP0DN79 551 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 MTHFD1P11586 935 aaKnown RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 PEBP1P30086 187 aaKnown RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 SPRP35270 261 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 CBSP35520 551 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 PPARGP37231 505 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 PLA2G5P39877 138 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 SLC26A3P40879 764 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 ACADVLP49748 655 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
LMNB1-208ENST00000504788 RAB10P61026 200 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 SLC18A2Q05940 514 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 HSPA14Q0VDF9 509 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 DNAJC3Q13217 504 aa4.81□□□□□ -1.64
LMNB1-208ENST00000504788 MPP2Q14168 576 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms