RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CAPN8A6NHC0 703 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 H3BN98 237 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 TGFB1P01137 390 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 MTPNP58546 118 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 RPL26P61254 145 aaKnown RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 DAB2P98082 770 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 NCEH1Q6PIU2 408 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 SLC30A9Q6PML9 568 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 KDELC1Q6UW63 502 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF783Q6ZMS7 281 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 FAM129CQ86XR2 697 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ACVR1CQ8NER5 493 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ANKRD49Q8WVL7 239 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 KCNN1Q92952 543 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 CIB1Q99828 191 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 HOPXQ9BPY8 73 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 C9orf16Q9BUW7 83 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 DERL2Q9GZP9 239 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 TRIT1Q9H3H1 467 aaKnown RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 ARHGEF3Q9NR81 526 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 RPL26L1Q9UNX3 145 aaKnown RBP13.84□□□□□ -0.19
TCOF1-207ENST00000504761 POMPQ9Y244 141 aa13.84□□□□□ -0.19
TCOF1-207ENST00000504761 TRIM24O15164 1050 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PFDN1O60925 122 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 GUCY1B2O75343 617 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 HMGCLP35914 325 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 GJA8P48165 433 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 TNK2Q07912 1038 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 TMEM115Q12893 351 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 GSTA3Q16772 222 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 SUSD1Q6UWL2 747 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PQLC1Q8N2U9 271 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PROX1Q92786 737 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 FAIM2Q9BWQ8 316 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 KLHL28Q9NXS3 571 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 ADGRE2Q9UHX3 823 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 ITM2BQ9Y287 266 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PTGDR2Q9Y5Y4 395 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 A0A1W2PP55 124 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 MATN2O00339 956 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 KAT7O95251 611 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 IFNA16P05015 189 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 ZNF30P17039 623 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 GAREM2Q75VX8 874 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 TREML1Q86YW5 311 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 OR10A6Q8NH74 314 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PRR11Q96HE9 360 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 REEP1Q9H902 201 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 EQTNQ9NQ60 294 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PDP2Q9P2J9 529 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 CNOT6Q9ULM6 557 aaKnown RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 LDB2O43679 373 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 TLX1P31314 330 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 CLK1P49759 484 aaKnown RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 CSTF3Q12996 717 aaKnown RBP13.83□□□□□ -0.2
TCOF1-207ENST00000504761 ANO7Q6IWH7 933 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 CYP4Z1Q86W10 505 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PIANPQ8IYJ0 282 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 PHC3Q8NDX5 983 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 OR4A15Q8NGL6 344 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 MGME1Q9BQP7 344 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 SFXN1Q9H9B4 322 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 RAB23Q9ULC3 237 aa13.83□□□□□ -0.2
TCOF1-207ENST00000504761 hCG_2014768A0A024R1R8 64 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 NR2F1P10589 423 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 CEBPBP17676 345 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 DGKEP52429 567 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 CYS1Q717R9 158 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 PCDHGA11Q9Y5H2 935 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 DRGXA6NNA5 263 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 RFXAPO00287 272 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 CST1P01037 141 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 BPIP17213 487 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 KCNA5P22460 613 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 IDH2P48735 452 aaKnown RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 SGSHP51688 502 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 MAPK10P53779 464 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 PHKG1Q16816 387 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 TECRLQ5HYJ1 363 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 ZNF678Q5SXM1 525 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 TFGQ92734 400 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 NMD3Q96D46 503 aaKnown RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 S100A14Q9HCY8 104 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 CCL26Q9Y258 94 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 RNF11Q9Y3C5 154 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 EP400Q96L91 3159 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 A0A088AWK7 358 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 FPGTO14772 594 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 TSPAN6O43657 245 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 DYRK3O43781 588 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 GBAP04062 536 aa13.82□□□□□ -0.2
TCOF1-207ENST00000504761 ZNF10P21506 573 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 RPS14P62263 151 aaKnown RBP13.82□□□□□ -0.2
TCOF1-207ENST00000504761 SCML4Q8N228 414 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms