RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 HDCP19113 662 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 LTKP29376 864 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 SLC5A2P31639 672 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 NHLH1Q02575 133 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CDK10Q15131 360 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PSMD5Q16401 504 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HYAL4Q2M3T9 481 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF5Q5TYX0 476 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF468Q5VIY5 522 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF9Q5VWM5 478 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PRAMEF6Q5VXH4 476 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DENND1BQ6P3S1 775 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 METAP1DQ6UB28 335 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TECPR1Q7Z6L1 1165 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 FMR1NBQ8N0W7 255 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 EIF1ADQ8N9N8 165 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 Q8NFD4 153 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TRUB1Q8WWH5 349 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HSD17B8Q92506 261 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 PGAP3Q96FM1 320 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 GMCL1Q96IK5 515 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MBOAT7Q96N66 472 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 TEFMQ96QE5 360 aaKnown RBP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 KCNK16Q96T55 309 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 CLPBQ9H078 707 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 BCO1Q9HAY6 547 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MAN2C1Q9NTJ4 1040 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ARHGAP20Q9P2F6 1191 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HPSEQ9Y251 543 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 HIF3AQ9Y2N7 669 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLCN3-204ENST00000504131 MADDQ8WXG6 1647 aa6.17□□□□□ -1.42
CLCN3-204ENST00000504131 ERVK-7P63135 1459 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PNMA6EA0A0J9YXQ4 647 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ASB14A6NK59 587 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ERVV-2B6SEH9 535 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 APEX1P27695 318 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CDH5P33151 784 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CAPGP40121 348 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 MAGEA12P43365 314 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RPS9P46781 194 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 MRPL19P49406 292 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 IFI35P80217 286 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TFDP1Q14186 410 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RFTN1Q14699 578 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 QPCTQ16769 361 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SUPT20HL1Q3ZLR7 823 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 OXLD1Q5BKU9 147 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RIPPLY2Q5TAB7 128 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 GPAT2Q6NUI2 795 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 UGT3A1Q6NUS8 523 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 HHIPL2Q6UWX4 724 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF705AQ6ZN79 300 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 VASH2Q86V25 355 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 IL17RCQ8NAC3 791 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TMEM35BQ8NCS4 154 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 C2CD4CQ8TF44 421 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TAAR8Q969N4 342 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CMTM5Q96DZ9 223 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 FCRL4Q96PJ5 515 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RAB34Q9BZG1 259 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 BOLA2Q9H3K6 86 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TRPV4Q9HBA0 871 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SPHK1Q9NYA1 384 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF70Q9UC06 446 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SHOC2Q9UQ13 582 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PTPRTO14522 1441 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ARHGAP31Q2M1Z3 1444 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF705GA8MUZ8 300 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RPLP2P05387 115 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 FMO4P31512 558 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 FMO3P31513 532 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TXKP42681 527 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ATP5IP56385 69 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SLC39A14Q15043 492 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZACNQ401N2 412 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 LGSNQ5TDP6 509 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ADCK2Q7Z695 626 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RCOR2Q8IZ40 523 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SLC25A41Q8N5S1 370 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RASGEF1AQ8N9B8 481 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CLRN3Q8NCR9 226 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 OR1M1Q8NGA1 313 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF431Q8TF32 576 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZBTB18Q99592 522 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 DPYSL5Q9BPU6 564 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 OCSTAMPQ9BR26 566 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 MED18Q9BUE0 208 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SLC19A3Q9BZV2 496 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SLC6A16Q9GZN6 736 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZDHHC6Q9H6R6 413 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 LRRC4BQ9NT99 713 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 DIMT1Q9UNQ2 313 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 URADA6NGE7 173 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms