RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TRIT1Q9H3H1 467 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 IPPKQ9H8X2 491 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CARS2Q9HA77 564 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 SPC25Q9HBM1 224 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 HMG20AQ9NP66 347 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 LIMD1Q9UGP4 676 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 AGO1Q9UL18 857 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 POLR3HQ9Y535 204 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 RAI2Q9Y5P3 530 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 MAGED1Q9Y5V3 778 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 C1orf232A0A0U1RR37 186 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 FAM220BPB1ANY3 271 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 SLC1A7O00341 560 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 FFAR2O15552 330 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 B4GALT3O60512 393 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 TLR5O60602 858 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 ERN1O75460 977 aaKnown RBP14.71□□□□□ -0.05
SNF8-203ENST00000504000 TPD52P55327 224 aaPredicted RBP14.71□□□□□ -0.05
SNF8-203ENST00000504000 OCA2Q04671 838 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 CACNG1Q06432 222 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 TRIM32Q13049 653 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 NKG7Q16617 165 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 ZRANB3Q5FWF4 1079 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 CACHD1Q5VU97 1274 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 LAIR2Q6ISS4 152 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 ENPP6Q6UWR7 440 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 CHST9Q7L1S5 443 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 CALHM3Q86XJ0 350 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 ZNF280BQ86YH2 543 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 MICU2Q8IYU8 434 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 OR10A6Q8NH74 314 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 SH3YL1Q96HL8 342 aaPredicted RBP14.71□□□□□ -0.05
SNF8-203ENST00000504000 NEURL2Q9BR09 285 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 ZBED2Q9BTP6 218 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 THUMPD3Q9BV44 507 aaKnown RBP14.71□□□□□ -0.05
SNF8-203ENST00000504000 MROQ9BYG7 248 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 CLMPQ9H6B4 373 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 KAT8Q9H7Z6 458 aaKnown RBP14.71□□□□□ -0.05
SNF8-203ENST00000504000 ERVW-1Q9UQF0 538 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 OARD1Q9Y530 152 aa14.71□□□□□ -0.05
SNF8-203ENST00000504000 GREB1Q4ZG55 1949 aa14.71□□□□□ -0.06
SNF8-203ENST00000504000 BOLA2-SMG1P6H3BVE0 249 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 GNGT2O14610 69 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 SLC22A1O15245 554 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 RECQL5O94762 991 aaPredicted RBP14.7□□□□□ -0.06
SNF8-203ENST00000504000 GABARAPO95166 117 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 PGRP06401 933 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 HMBSP08397 361 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 IL7RP16871 459 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 CDH3P22223 829 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 PIGAP37287 484 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 DCTP40126 519 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 GNPDA1P46926 289 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 SLC11A2P49281 568 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 OXA1LQ15070 435 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 CTF1Q16619 201 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 MEP1AQ16819 746 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 DPY19L1Q2PZI1 675 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 CTU2Q2VPK5 515 aaKnown RBP14.7□□□□□ -0.06
SNF8-203ENST00000504000 CTXN3Q4LDR2 81 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 LRIF1Q5T3J3 769 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 IGFN1Q86VF2 1251 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 MSRB3Q8IXL7 192 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 FAM9CQ8IZT9 166 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 FAM86B1Q8N7N1 296 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 ATAD1Q8NBU5 361 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 LPCAT1Q8NF37 534 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 UBTD2Q8WUN7 234 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 NTMT1Q9BV86 223 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 DPY30Q9C005 99 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 GABARAPL1Q9H0R8 117 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 SMURF2Q9HAU4 748 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 NECTIN3Q9NQS3 549 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 HECAQ9UBI9 543 aaPredicted RBP14.7□□□□□ -0.06
SNF8-203ENST00000504000 TRPS1Q9UHF7 1281 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 ITGB1BP2Q9UKP3 347 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 MAN2B2Q9Y2E5 1009 aa14.7□□□□□ -0.06
SNF8-203ENST00000504000 GLTPD2A6NH11 291 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 ZNF99A8MXY4 864 aaPredicted RBP14.69□□□□□ -0.06
SNF8-203ENST00000504000 PRKD3O94806 890 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 SLC2A4P14672 509 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 HTR1BP28222 390 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 SLC6A4P31645 630 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 MAGEA2P43356 314 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 RGS4P49798 205 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 MLLT10P55197 1068 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 GPR17Q13304 367 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 AQP6Q13520 282 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 PON2Q15165 354 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 HABP4Q5JVS0 413 aaKnown RBP14.69□□□□□ -0.06
SNF8-203ENST00000504000 TTC23LQ6PF05 361 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 C17orf99Q6UX52 265 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 RBM23Q86U06 439 aaKnown RBP14.69□□□□□ -0.06
SNF8-203ENST00000504000 DCP2Q8IU60 420 aaKnown RBP14.69□□□□□ -0.06
SNF8-203ENST00000504000 CFAP52Q8N1V2 620 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 SETD9Q8NE22 299 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 TRPV1Q8NER1 839 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 FBXO30Q8TB52 745 aa14.69□□□□□ -0.06
SNF8-203ENST00000504000 C2orf15Q8WU43 125 aaKnown RBP14.69□□□□□ -0.06
SNF8-203ENST00000504000 FAM162AQ96A26 154 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms