RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RPL10AP62906 217 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CHRNB3Q05901 458 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SEMA3AQ14563 771 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GRK1Q15835 563 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TBRG1Q3YBR2 411 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PIGGQ5H8A4 983 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GARNL3Q5VVW2 1013 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CCBE1Q6UXH8 406 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PDZD4Q76G19 769 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PLEKHH3Q7Z736 793 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZDHHC13Q8IUH4 622 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GALNT4Q8N4A0 578 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 METTL25Q8N6Q8 603 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 C1orf54Q8WWF1 131 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 USP13Q92995 863 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 NXPE2Q96DL1 559 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FRMD6Q96NE9 622 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SECISBP2Q96T21 854 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RAD9AQ99638 391 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 DPYSL5Q9BPU6 564 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ARMT1Q9H993 441 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PRDM8Q9NQV8 689 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MAN2C1Q9NTJ4 1040 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ADA2Q9NZK5 511 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TJP2Q9UDY2 1190 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CDH9Q9ULB4 789 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RAB23Q9ULC3 237 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PDE10AQ9Y233 779 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PIEZO2Q9H5I5 2752 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CACNA1BQ00975 2339 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PDE4DIPQ5VU43 2346 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PIKFYVEQ9Y2I7 2098 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC182A6NF36 153 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 HACD1B0YJ81 288 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RALAP11233 206 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF182P17025 639 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MSH3P20585 1137 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GALNSP34059 522 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MLLT3P42568 568 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 EEFSECP57772 596 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CSTF3Q12996 717 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FADDQ13158 208 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SERINC3Q13530 473 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PLCL1Q15111 1095 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PSMD5Q16401 504 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MDH1BQ5I0G3 518 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PERM1Q5SV97 790 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF648Q5T619 568 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MZT2BQ6NZ67 158 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZCCHC8Q6NZY4 707 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ARSKQ6UWY0 536 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 UNC5AQ6ZN44 842 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RFPL4BQ6ZWI9 263 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SLCO6A1Q86UG4 719 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 HPS6Q86YV9 775 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC36Q8IYA8 594 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PPM1KQ8N3J5 372 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SLC15A4Q8N697 577 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TTC29Q8NA56 475 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 OR7G3Q8NG95 312 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 OR10T2Q8NGX3 314 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 BAHD1Q8TBE0 780 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 IGFBPL1Q8WX77 278 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GJA10Q969M2 543 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 C18orf25Q96B23 403 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 EEF2KMTQ96G04 330 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FEM1CQ96JP0 617 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZSWIM3Q96MP5 696 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PDCD10Q9BUL8 212 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MTMR12Q9C0I1 747 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC40Q9H9A6 602 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FZD3Q9NPG1 666 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ADAM30Q9UKF2 790 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FBXO5Q9UKT4 447 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ING4Q9UNL4 249 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RNF11Q9Y3C5 154 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 A0A075B6Q4 140 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SLC35F4A4IF30 521 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC154A6NI56 674 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 J3QRK9 145 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FOXN3O00409 490 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SLC9A3R1O14745 358 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 AIM2O14862 343 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CCNT1O60563 726 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 IFNA4P05014 189 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF3P17036 446 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PTX3P26022 381 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 HTR3AP46098 478 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 NRIP1P48552 1158 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 STARP49675 285 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 KLK7P49862 253 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF143P52747 638 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ELP6Q0PNE2 266 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 NCOA4Q13772 614 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GEN1Q17RS7 908 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TBCELQ5QJ74 424 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CLVS2Q5SYC1 327 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GRTP1Q5TC63 336 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LCN8Q6JVE9 175 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJC24Q6P3W2 148 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms