RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 LOC730098B7Z3J9 87 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 PGRP06401 933 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 ELK4P28324 431 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 STT3AP46977 705 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 CRHR2Q13324 411 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 KDELC1Q6UW63 502 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 SERINC5Q86VE9 423 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 PHC3Q8NDX5 983 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 C3orf30Q96M34 536 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
SPCS3-201ENST00000503362 ACAT2Q9BWD1 397 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 TREX1Q9NSU2 369 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 VPS4AQ9UN37 437 aa13.03□□□□□ -0.32
SPCS3-201ENST00000503362 MTMR11A4FU01 709 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 TFAP2AP05549 437 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 PRPS2P11908 318 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 CSKP41240 450 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 ALDH3A2P51648 485 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 NCF4Q15080 339 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 MEP1AQ16819 746 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 PSAPL1Q6NUJ1 521 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 SNX20Q7Z614 316 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.32
SPCS3-201ENST00000503362 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 KCNJ9Q92806 393 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 POP5Q969H6 163 aaKnown RBP13.02□□□□□ -0.32
SPCS3-201ENST00000503362 PLD4Q96BZ4 506 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 ZCCHC2Q9C0B9 1178 aaKnown RBP13.02□□□□□ -0.32
SPCS3-201ENST00000503362 POPDC3Q9HBV1 291 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 AIG1Q9NVV5 245 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 RAB23Q9ULC3 237 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 CDC14AQ9UNH5 594 aa13.02□□□□□ -0.32
SPCS3-201ENST00000503362 SLC6A2P23975 617 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 SLC16A1P53985 500 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 OR4D2P58180 307 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 EMX2Q04743 252 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 HACD2Q6Y1H2 254 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 PSKH2Q96QS6 385 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 TOR3AQ9H497 397 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 EFCAB10A6NFE3 127 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 ANKDD1BA6NHY2 528 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 MFN2O95140 757 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 PPP2R1BP30154 601 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 NSG1P42857 185 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 LRP8Q14114 963 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 LAPTM4AQ15012 233 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 MED22Q15528 200 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 CES4AQ5XG92 561 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 PHACTR4Q8IZ21 702 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 L3HYPDHQ96EM0 354 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 YTHDF1Q9BYJ9 559 aaKnown RBP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 RPF2Q9H7B2 306 aaKnown RBP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 GIMAP4Q9NUV9 329 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-201ENST00000503362 KLHL20Q9Y2M5 609 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 ACTL7AQ9Y615 435 aa13.02□□□□□ -0.33
SPCS3-201ENST00000503362 PRSS51A0A1B0GVH4 220 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 ARRB2P32121 409 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 SEPHS1P49903 392 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 GALNT1Q10472 559 aaPredicted RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 CHRNA6Q15825 494 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 PDCD4Q53EL6 469 aaKnown RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 EIF3MQ7L2H7 374 aaKnown RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 TTC9BQ8N6N2 239 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 PDPRQ8NCN5 879 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 OR4A15Q8NGL6 344 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 H0YJX3 145 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 DFNA5O60443 496 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 CLDN7O95471 211 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 ANXA4P09525 319 aaPredicted RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 RFC2P35250 354 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 HNF4AP41235 474 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 ARCN1P48444 511 aaKnown RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 ACLYP53396 1101 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 GPR17Q13304 367 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 CARTPTQ16568 116 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 TIMM50Q3ZCQ8 353 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 RAB41Q5JT25 222 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 TMPRSS11BQ86T26 416 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 LINC01465Q8N7H1 131 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 TSPEARQ8WU66 669 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 HTRA1Q92743 480 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 AURKBQ96GD4 344 aaPredicted RBP13.01□□□□□ -0.33
SPCS3-201ENST00000503362 CMTM6Q9NX76 183 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 EBF1Q9UH73 591 aa13.01□□□□□ -0.33
SPCS3-201ENST00000503362 RNF11Q9Y3C5 154 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms