RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 CCL27Q9Y4X3 112 aa24.07■■□□□ 1.44
DDX41-202ENST00000503078 COMMD10Q9Y6G5 202 aa24.07■■□□□ 1.44
DDX41-202ENST00000503078 OTCP00480 354 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 CCDC159P0C7I6 412 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 RXRGP48443 463 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 PPP1R8Q12972 351 aaKnown RBP24.06■■□□□ 1.44
DDX41-202ENST00000503078 TMEM179BQ7Z7N9 219 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 LGI2Q8N0V4 545 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 SH3GL1Q99961 368 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 TBCDQ9BTW9 1192 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 MAGEH1Q9H213 219 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 ATAD3AQ9NVI7 634 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 MTRRQ9UBK8 725 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 UBA2Q9UBT2 640 aaPredicted RBP24.06■■□□□ 1.44
DDX41-202ENST00000503078 EIF3LQ9Y262 564 aaKnown RBP24.06■■□□□ 1.44
DDX41-202ENST00000503078 FNDC3AQ9Y2H6 1198 aaKnown RBP24.06■■□□□ 1.44
DDX41-202ENST00000503078 PRKACGP22612 351 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 RYKP34925 604 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 RPS3AP61247 264 aaKnown RBP24.06■■□□□ 1.44
DDX41-202ENST00000503078 RING1Q06587 406 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 FAM174BQ3ZCQ3 159 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 CXCL17Q6UXB2 119 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 LINC00299Q6ZSB3 139 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 MSRB3Q8IXL7 192 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 CHCHD4Q8N4Q1 142 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 PIK3C3Q8NEB9 887 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 FRS2Q8WU20 508 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 VMP1Q96GC9 406 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 IPPKQ9H8X2 491 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 TLR8Q9NR97 1041 aaKnown RBP24.06■■□□□ 1.44
DDX41-202ENST00000503078 SLC25A37Q9NYZ2 338 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 PCDHB5Q9Y5E4 795 aa24.06■■□□□ 1.44
DDX41-202ENST00000503078 IQCF5A8MTL0 148 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 F5H5T6 163 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 SLC16A6O15403 523 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 E2F6O75461 281 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 ESR1P03372 595 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 HPCAL1P37235 193 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 CLCN7P51798 805 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 TRAF3Q13114 568 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 IL18R1Q13478 541 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 PON2Q15165 354 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 MILR1Q7Z6M3 343 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 SLCO6A1Q86UG4 719 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 GALNT13Q8IUC8 556 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 ZCCHC7Q8N3Z6 543 aaKnown RBP24.05■■□□□ 1.44
DDX41-202ENST00000503078 TTC9BQ8N6N2 239 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 BCL7BQ9BQE9 202 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 MAGIXQ9H6Y5 334 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 BPIFA1Q9NP55 256 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 SCUBE2Q9NQ36 999 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 DCAF13Q9NV06 445 aaKnown RBP24.05■■□□□ 1.44
DDX41-202ENST00000503078 ZMYM5Q9UJ78 669 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 PCDHGB1Q9Y5G3 927 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 B4GALT3O60512 393 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 GABARAPO95166 117 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 S100BP04271 92 aaPredicted RBP24.05■■□□□ 1.44
DDX41-202ENST00000503078 RETP07949 1114 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 CR2P20023 1033 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 THPOP40225 353 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 ADAMTSL2Q86TH1 951 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 DCP2Q8IU60 420 aaKnown RBP24.05■■□□□ 1.44
DDX41-202ENST00000503078 MICU2Q8IYU8 434 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 FAR1Q8WVX9 515 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 S100ZQ8WXG8 99 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 ZNF566Q969W8 418 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 PDLIM5Q96HC4 596 aaKnown RBP24.05■■□□□ 1.44
DDX41-202ENST00000503078 SPON2Q9BUD6 331 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 EXD2Q9NVH0 621 aa24.05■■□□□ 1.44
DDX41-202ENST00000503078 CHD5Q8TDI0 1954 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 PTGER3P43115 390 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 EMX1Q04741 257 aaPredicted RBP24.04■■□□□ 1.44
DDX41-202ENST00000503078 TAF10Q12962 218 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 RFX4Q33E94 735 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 RUNDC3AQ59EK9 446 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 GNASQ5JWF2 1037 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 SBSNQ6UWP8 590 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 GPR149Q86SP6 731 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 ABI1Q8IZP0 508 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 ARL10Q8N8L6 244 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 GLB1L3Q8NCI6 653 aaPredicted RBP24.04■■□□□ 1.44
DDX41-202ENST00000503078 FBLIM1Q8WUP2 373 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 DPY30Q9C005 99 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 TRIT1Q9H3H1 467 aaKnown RBP24.04■■□□□ 1.44
DDX41-202ENST00000503078 TMEFF2Q9UIK5 374 aaPredicted RBP24.04■■□□□ 1.44
DDX41-202ENST00000503078 INVSQ9Y283 1065 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 AP3M1Q9Y2T2 418 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 ORC6Q9Y5N6 252 aa24.04■■□□□ 1.44
DDX41-202ENST00000503078 TRIM43BA6NCK2 446 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 AXIN1O15169 862 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 STX7O15400 261 aaKnown RBP24.03■■□□□ 1.44
DDX41-202ENST00000503078 RGS14O43566 566 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 MAGEA11P43364 429 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 NRIP1P48552 1158 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 MAD2L1Q13257 205 aaPredicted RBP24.03■■□□□ 1.44
DDX41-202ENST00000503078 CDK5R2Q13319 367 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 ZC3H12BQ5HYM0 836 aaKnown RBP24.03■■□□□ 1.44
DDX41-202ENST00000503078 DNAJC14Q6Y2X3 702 aaPredicted RBP24.03■■□□□ 1.44
DDX41-202ENST00000503078 OR7A2PQ8NGA2 310 aa24.03■■□□□ 1.44
DDX41-202ENST00000503078 NCLNQ969V3 563 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms