RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ACAT1P24752 427 aaKnown RBP5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 Q0VFX4 171 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 AP1B1Q10567 949 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 RCN2Q14257 317 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 GAPVD1Q14C86 1478 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 C2orf76Q3KRA6 126 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 XKR9Q5GH70 373 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 GPRASP1Q5JY77 1395 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 MFSD12Q6NUT3 480 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLC38A5Q8WUX1 472 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 HEXDCQ8WVB3 486 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 ABCA10Q8WWZ4 1543 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 NSMAFQ92636 917 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 KRT35Q92764 455 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 RPL36ALQ969Q0 106 aaKnown RBP5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 SNX21Q969T3 373 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 ZG16BQ96DA0 208 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 MTBPQ96DY7 904 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 CABS1Q96KC9 395 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 UTP14AQ9BVJ6 771 aaKnown RBP5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 FN3KQ9H479 309 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 ITGA11Q9UKX5 1188 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 AMDHD2Q9Y303 409 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 PCDHAC2Q9Y5I4 1007 aa5.1□□□□□ -1.59
HMGB1P3-201ENST00000502802 CKAP5Q14008 2032 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 SYNJ2O15056 1496 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 ELOVL7A1L3X0 281 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 LINC01553A4QN01 128 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR5K3A6NET4 321 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 C5orf52A6NGY3 159 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 C15orf62A8K5M9 175 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 ANKRD66B4E2M5 251 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLC33A1O00400 549 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 AP5Z1O43299 807 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 BUD23O43709 281 aaKnown RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 THEGLP0DJG4 465 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 PSG1P11464 419 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 TCF4P15884 667 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 HLA-DPA1P20036 260 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 CD22P20273 847 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 MPZP25189 248 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 CD38P28907 300 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 TKTP29401 623 aaKnown RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 SOAT1P35610 550 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 WNT5AP41221 380 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 TMPOP42166 694 aaKnown RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 LHX1P48742 406 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 ITGA7Q13683 1181 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 CDO1Q16878 200 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 FAM122CQ6P4D5 195 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 SRRM1Q8IYB3 904 aaKnown RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 RNF113BQ8IZP6 322 aaKnown RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 PGBD5Q8N414 524 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR8H1Q8NGG4 311 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR5M8Q8NGP6 311 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 SEMA4DQ92854 862 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 FAM84BQ96KN1 310 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR1F2PQ96R84 312 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 GTPBP2Q9BX10 602 aaKnown RBP5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 TCP11L1Q9NUJ3 509 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 MIOSQ9NXC5 875 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 VPS18Q9P253 973 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 CACNG4Q9UBN1 327 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 FRMD4BQ9Y2L6 1034 aa5.09□□□□□ -1.59
HMGB1P3-201ENST00000502802 TOP2BQ02880 1626 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 PDS5AQ29RF7 1337 aaKnown RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 NEMP2A6NFY4 417 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM178BH3BS89 294 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 DDX39AO00148 427 aaKnown RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 SOCS2O14508 198 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 MID1O15344 667 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 GPR137BO60478 399 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 KINO60870 393 aaKnown RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 KCNJ13O60928 360 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 WISP2O76076 250 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 BMP10O95393 424 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 CLDN14O95500 239 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ACSL3O95573 720 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 MT-ND3P03897 115 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 RLN1P04808 185 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 PLA2G4BP0C869 781 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 SAGP10523 405 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 EEF2P13639 858 aaKnown RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 KCNJ4P48050 445 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 MAPK12P53778 367 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TPD52P55327 224 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 PNRC1Q12796 327 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 KLF9Q13886 244 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM35AQ53FP2 167 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TCTE1Q5JU00 501 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 GRTP1Q5TC63 336 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 C8orf82Q6P1X6 216 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ALKBH5Q6P6C2 394 aaKnown RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ENPP7Q6UWV6 458 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF704Q6ZNC4 412 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 DGLUCYQ7Z3D6 616 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms