RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 MMP27Q9H306 513 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 DENND2DQ9H6A0 471 aaPredicted RBP2.27□□□□□ -2.05
RBM39-242ENST00000498280 SLA2Q9H6Q3 261 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 TRPC7Q9HCX4 862 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 SLC35C2Q9NQQ7 365 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 KLHL1Q9NR64 748 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 TAB2Q9NYJ8 693 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 NFKBIL1Q9UBC1 381 aaPredicted RBP2.27□□□□□ -2.05
RBM39-242ENST00000498280 RHCGQ9UBD6 479 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 CRNNQ9UBG3 495 aaPredicted RBP2.27□□□□□ -2.05
RBM39-242ENST00000498280 DLGAP4Q9Y2H0 992 aa2.27□□□□□ -2.05
RBM39-242ENST00000498280 WBP11Q9Y2W2 641 aaKnown RBP2.27□□□□□ -2.05
RBM39-242ENST00000498280 ASTN2O75129 1339 aaPredicted RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 KAT6BQ8WYB5 2073 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 PRSS51A0A1B0GVH4 220 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 CTAGE9A4FU28 777 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ASPDHA6ND91 283 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 KRTAP16-1A8MUX0 517 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 HEPACAM2A8MVW5 462 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 H0YIN7 160 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 CAPN9O14815 690 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 SPRY1O43609 319 aaPredicted RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 CSPG5O95196 566 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 BMP10O95393 424 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 PATE4P0C8F1 98 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 CTAGE8P0CG41 777 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 GJA1P17302 382 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 MATR3P43243 847 aaKnown RBP eCLIP2.26□□□□□ -2.05
RBM39-242ENST00000498280 CAPZA2P47755 286 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ARCN1P48444 511 aaKnown RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 AIMP1Q12904 312 aaKnown RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 PRKAA1Q13131 559 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 PRPF4BQ13523 1007 aaKnown RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 SNAPC1Q16533 368 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 LETM2Q2VYF4 491 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 C6orf163Q5TEZ5 329 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 FIGLAQ6QHK4 219 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 PLXDC2Q6UX71 529 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 CAMKMTQ7Z624 323 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 CTAGE4Q8IX94 777 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ZNF595Q8IYB9 648 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 AFAP1Q8N556 730 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 POMGNT2Q8NAT1 580 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 KCNH5Q8NCM2 988 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 OR2AJ1Q8NGZ0 328 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 GRAPLQ8TC17 118 aaPredicted RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 SMPDL3BQ92485 455 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ZNF524Q96C55 264 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 PGAP3Q96FM1 320 aaPredicted RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 LINC00615Q96LM1 132 aaPredicted RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 FAM81BQ96LP2 452 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ZNF599Q96NL3 588 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 OR6C1Q96RD1 312 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 SLX1AQ9BQ83 275 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 NEURL2Q9BR09 285 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 POLR3CQ9BUI4 534 aaPredicted RBP2.26□□□□□ -2.05
RBM39-242ENST00000498280 ANKRD2Q9GZV1 360 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 TBC1D17Q9HA65 648 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ABCF3Q9NUQ8 709 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 OSER1Q9NX31 292 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 MIOSQ9NXC5 875 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 HAO2Q9NYQ3 351 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 GDE1Q9NZC3 331 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 NPAP1Q9NZP6 1156 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 WDR35Q9P2L0 1181 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 ANAPC2Q9UJX6 822 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 POU2F3Q9UKI9 436 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 YIPF1Q9Y548 306 aa2.26□□□□□ -2.05
RBM39-242ENST00000498280 TEX13DA0A0J9YY54 714 aaPredicted RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 A0A1W2PNU3 283 aaPredicted RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 TRBC2A0A5B9 178 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 URADA6NGE7 173 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 PMS2P5A8MQ11 134 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 ANKRD66B4E2M5 251 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 XRCC3O43542 346 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 SSX4O60224 188 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 SYNCRIPO60506 623 aaKnown RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 PRAMEF11O60813 436 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 DIAPH2O60879 1101 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 TADA2AO75478 443 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 TOMM70O94826 608 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 SLCO2B1O94956 709 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 TFAP2AP05549 437 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 LIPFP07098 398 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 CPT2P23786 658 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 MC5RP33032 325 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 AHRP35869 848 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 IL15P40933 162 aaPredicted RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 PSMC4P43686 418 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 MMP15P51511 669 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 CCR3P51677 355 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 EEF1A1P68104 462 aaKnown RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 RPL24P83731 157 aaKnown RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 GAGE2BQ13066 116 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 PLA2G7Q13093 441 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 ALCAMQ13740 583 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 SNTB1Q13884 538 aaKnown RBP2.25□□□□□ -2.05
RBM39-242ENST00000498280 KYNUQ16719 465 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 GAGE2EQ4V326 116 aa2.25□□□□□ -2.05
RBM39-242ENST00000498280 CBWD6Q4V339 395 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms