RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 MYO9BQ13459 2157 aa12.23□□□□□ -0.45
AFF3-215ENST00000498090 DOCK4Q8N1I0 1966 aa12.23□□□□□ -0.45
AFF3-215ENST00000498090 DENND4AQ7Z401 1863 aa12.23□□□□□ -0.45
AFF3-215ENST00000498090 TCRBV5S2A0A599 114 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 H0YAE9 185 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 LDLRP01130 860 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 RPS3P23396 243 aaKnown RBP eCLIP12.22□□□□□ -0.45
AFF3-215ENST00000498090 WEE1P30291 646 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 VIPR2P41587 438 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 DIO3P55073 304 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 NUP107P57740 925 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 MAD2L1Q13257 205 aaPredicted RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 CAPRIN1Q14444 709 aaKnown RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 ZBED5Q49AG3 693 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 PITRM1Q5JRX3 1037 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 C6orf136Q5SQH8 315 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 ATAT1Q5SQI0 421 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 LYPLAL1Q5VWZ2 237 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CES5AQ6NT32 575 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 LPCAT2Q7L5N7 544 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 PATL1Q86TB9 770 aaKnown RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 SNX31Q8N9S9 440 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CDH7Q9ULB5 785 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 DHRS7Q9Y394 339 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 PTGDR2Q9Y5Y4 395 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 SAC3D1A6NKF1 404 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 H3BQ06 376 aaPredicted RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 H3BSA7 217 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 RAD51BO15315 384 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 INPP4BO15327 924 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 SYNCRIPO60506 623 aaKnown RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 GMNNO75496 209 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 OTCP00480 354 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CHRM3P20309 590 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CAPGP40121 348 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 TGFBIQ15582 683 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 ZRANB3Q5FWF4 1079 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CTSL3PQ5NE16 218 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 NANOGP8Q6NSW7 305 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 NCEH1Q6PIU2 408 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 FRA10AC1Q70Z53 315 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 GPR141Q7Z602 305 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 EPHX4Q8IUS5 362 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CPXM2Q8N436 756 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 TTC30BQ8N4P2 665 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 DHRSXQ8N5I4 330 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 FNDC5Q8NAU1 212 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 OR8J3Q8NGG0 315 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 DNAJB8Q8NHS0 232 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 ZNF420Q8TAQ5 688 aaPredicted RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 SUSD6Q92537 303 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 SMARCD2Q92925 531 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 CNDP2Q96KP4 475 aaKnown RBP12.22□□□□□ -0.45
AFF3-215ENST00000498090 PPP3R2Q96LZ3 170 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 RIPOR3Q96MK2 946 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 PLEKHG4BQ96PX9 1271 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 P2RY12Q9H244 342 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 NANOGQ9H9S0 305 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 MAGEE1Q9HCI5 957 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 SMOXQ9NWM0 555 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 GDE1Q9NZC3 331 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 EGFL7Q9UHF1 273 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 IKZF3Q9UKT9 509 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 TIMM22Q9Y584 194 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 SLC30A1Q9Y6M5 507 aa12.22□□□□□ -0.45
AFF3-215ENST00000498090 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 ASPDHA6ND91 283 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 PRMT5O14744 637 aaPredicted RBP12.21□□□□□ -0.45
AFF3-215ENST00000498090 ACOX3O15254 700 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 CDH1P12830 882 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 ZNF7P17097 686 aaPredicted RBP12.21□□□□□ -0.45
AFF3-215ENST00000498090 JAK1P23458 1154 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 SLC5A2P31639 672 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 MTHFRP42898 656 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 RPS9P46781 194 aaKnown RBP12.21□□□□□ -0.45
AFF3-215ENST00000498090 RGRP47804 291 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 RGS4P49798 205 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 EPS8Q12929 822 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.45
AFF3-215ENST00000498090 TTC23LQ6PF05 361 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 CROCCP3Q8IVE0 287 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 SIDT2Q8NBJ9 832 aaKnown RBP12.21□□□□□ -0.45
AFF3-215ENST00000498090 DNAJB14Q8TBM8 379 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 PROKR1Q8TCW9 393 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 EEF1AKMT1Q8WVE0 214 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 ISG20Q96AZ6 181 aaKnown RBP12.21□□□□□ -0.45
AFF3-215ENST00000498090 NSMCE2Q96MF7 247 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 RDH12Q96NR8 316 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 SH3GL1Q99961 368 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 TRPV4Q9HBA0 871 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 PKD2L2Q9NZM6 624 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 GALPQ9UBC7 116 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 GIMAP2Q9UG22 337 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
AFF3-215ENST00000498090 CD207Q9UJ71 328 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms