RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 XIAPP98170 497 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 C11orf63Q6NUN7 778 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 CERS6Q6ZMG9 384 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 DET1Q7L5Y6 550 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 RAB43Q86YS6 212 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 CCDC50Q8IVM0 306 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 ENDOVQ8N8Q3 282 aaKnown RBP16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 SLC38A9Q8NBW4 561 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 SPDYE1Q8NFV5 336 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 SSC4DQ8WTU2 575 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 RMDN2Q96LZ7 410 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 SMAD5Q99717 465 aaKnown RBP16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 SLC7A5P2Q9GIP4 190 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 ACTR5Q9H9F9 607 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 SLAMF7Q9NQ25 335 aa16.36■□□□□ 0.21
TRAPPC3-207ENST00000497251 IGLV3-16A0A075B6K0 115 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 C2orf74A8MZ97 194 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 H7C0C1 242 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 H7C0S8 307 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 QSOX1O00391 747 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 GPR39O43194 453 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 SGTAO43765 313 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 POLBP06746 335 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 CETN2P41208 172 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 PTGIRP43119 386 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 MAGEA1P43355 309 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 ATP5OP48047 213 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 ZNF75DP51815 510 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 ITGA1P56199 1179 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 CCDC181Q5TID7 509 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 JMJD6Q6NYC1 403 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 CDKL3Q8IVW4 592 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 GPR135Q8IZ08 494 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 PNPLA2Q96AD5 504 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 NACC2Q96BF6 587 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 FERD3LQ96RJ6 166 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 RUFY1Q96T51 708 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 FICDQ9BVA6 458 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 PCMTD2Q9NV79 361 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 ZDHHC3Q9NYG2 299 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 GPR83Q9NYM4 423 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 FKBPLQ9UIM3 349 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 HYOU1Q9Y4L1 999 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 POLEQ07864 2286 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 CNTRLQ7Z7A1 2325 aa16.35■□□□□ 0.21
TRAPPC3-207ENST00000497251 SHANK1Q9Y566 2161 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 CCDC66A2RUB6 948 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 TMEM150CB9EJG8 249 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 E7EQ34 232 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 AP2A2O94973 939 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 LCA5LO95447 670 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 GNLYP22749 145 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 RBL1P28749 1068 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 CA5AP35218 305 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 PTPN7P35236 360 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 PLOD1Q02809 727 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 SSPNQ14714 243 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 NCF4Q15080 339 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 INPP5JQ15735 1006 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 FAM182AQ5T1J6 154 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 CPZQ66K79 652 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 HOOK3Q86VS8 718 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 SYTL1Q8IYJ3 562 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 RNF31Q96EP0 1072 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 FER1L6-AS2Q96M78 137 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 TLR10Q9BXR5 811 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 OR52A5Q9H2C5 316 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 COG4Q9H9E3 785 aa16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 PLEKHB1Q9UF11 243 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-207ENST00000497251 TRBV5-4A0A0C4DH59 114 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 GSAPA4D1B5 854 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 F8W8V4 182 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 KDM1AO60341 852 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 IPO13O94829 963 aaKnown RBP16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 ALPPP05187 535 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 CAPN1P07384 714 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZNF140P52738 457 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 MSLNQ13421 630 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZNF789Q5FWF6 425 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 ANKRD20A2Q5SQ80 823 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 VWA5B1Q5TIE3 1220 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 ANKRD20A1Q5TYW2 823 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 ANKRD20A3Q5VUR7 823 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 DUS1LQ6P1R4 473 aaKnown RBP16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 FAM198BQ6UWH4 519 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 AMIGO1Q86WK6 493 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 KLHDC8BQ8IXV7 354 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 OR1L3Q8NH93 324 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 PROKR1Q8TCW9 393 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 TCTN2Q96GX1 697 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 SGSM3Q96HU1 749 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 TRAPPC9Q96Q05 1148 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 POLG2Q9UHN1 485 aa16.33■□□□□ 0.2
TRAPPC3-207ENST00000497251 LIN7AO14910 233 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 CTNNA2P26232 953 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 ABRQ12979 859 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 CHAF1BQ13112 559 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms